RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PKP1Q13835 747 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 CCDC89Q8N998 374 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 LMBRD1Q9NUN5 540 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 MX2P20592 715 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 IL1RL1Q01638 556 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 IFRD2Q12894 506 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 STRN3Q13033 797 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 BANK1Q8NDB2 785 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 RAD50Q92878 1312 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 CYP2J2P51589 502 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 IFIH1Q9BYX4 1025 aaKnown RBP18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 CSRNP2Q9H175 543 aa18.62■□□□□ 0.57
TSPAN3-201ENST00000267970 CLTAP09496 248 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 STX2P32856 288 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 TNNI3KQ59H18 835 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 KAZNQ674X7 775 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 EFCC1Q9HA90 598 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 FPGT-TNNI3KV9GXZ4 949 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 MAP7Q14244 749 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 SFMBT2Q5VUG0 894 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 CCDC13Q8IYE1 715 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 EXOC3O60645 756 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 ANKRD36BQ8N2N9 1353 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 GIGYF1O75420 1035 aaPredicted RBP18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 ST7Q9NRC1 585 aa18.61■□□□□ 0.57
TSPAN3-201ENST00000267970 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 ZBTB7BO15156 539 aaPredicted RBP18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 SCYL2Q6P3W7 929 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 CABP7Q86V35 215 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 LINS1Q8NG48 757 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 PAK2Q13177 524 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 HELLSQ9NRZ9 838 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 PTPN22Q9Y2R2 807 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 SMTNP53814 917 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 CFAP221Q4G0U5 840 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 BZW2Q9Y6E2 419 aaKnown RBP18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 GIPC1O14908 333 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 RGS16O15492 202 aaPredicted RBP18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 CUL4BQ13620 913 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 TPH2Q8IWU9 490 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 VCXQ9H320 206 aa18.6■□□□□ 0.57
TSPAN3-201ENST00000267970 UFL1O94874 794 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 CALCRLQ16602 461 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 RILPL1Q5EBL4 403 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 SPECC1L-ADORA2AF8WAN1 911 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 ANKRD20A3Q5VUR7 823 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 LRWD1Q9UFC0 647 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 SYNJ2BP-COX16A0A087WUM0 186 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 KRT40Q6A162 431 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 MRPL46Q9H2W6 279 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 COX16Q9P0S2 106 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 CFBP00751 764 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 FRMPD2Q68DX3 1309 aaPredicted RBP18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
TSPAN3-201ENST00000267970 VWA3BQ502W6 1294 aa18.58■□□□□ 0.57
TSPAN3-201ENST00000267970 TRIM14Q14142 442 aa18.58■□□□□ 0.57
TSPAN3-201ENST00000267970 ANKRD13CQ8N6S4 541 aa18.58■□□□□ 0.57
TSPAN3-201ENST00000267970 CLIC6Q96NY7 704 aa18.58■□□□□ 0.57
TSPAN3-201ENST00000267970 TUBB4BP68371 445 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 WHAMMP3Q1A5X7 153 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 NACA2Q9H009 215 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 ENC1O14682 589 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 CUTAO60888 179 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 RUFY4Q6ZNE9 571 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 MAPKAPK5Q8IW41 473 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 PALM2Q8IXS6 379 aa18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 ANGEL1Q9UNK9 670 aaKnown RBP18.58■□□□□ 0.56
TSPAN3-201ENST00000267970 KRT12Q99456 494 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 ME3Q16798 604 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 LRCH2Q5VUJ6 765 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 CCDC117Q8IWD4 279 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 RNF168Q8IYW5 571 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 NRBP1Q9UHY1 535 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 RPAINQ86UA6 219 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 ABL1P00519 1130 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 E2F5Q15329 346 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 TNNI1P19237 187 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 CASP2P42575 452 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 C4orf50Q6ZRC1 276 aa18.57■□□□□ 0.56
TSPAN3-201ENST00000267970 KRIT1O00522 736 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 TECP42680 631 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 IFNAR2P48551 515 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 PDE11AQ9HCR9 933 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 SETSIPP0DME0 302 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 ARHGAP25P42331 645 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 TMTC1Q8IUR5 882 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 SCYL1Q96KG9 808 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 SAR1BQ9Y6B6 198 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 ZAP70P43403 619 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 EYA1Q99502 592 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 NOP56O00567 594 aaKnown RBP18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 MRPL12P52815 198 aaKnown RBP18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 TGFBRAP1Q8WUH2 860 aa18.56■□□□□ 0.56
TSPAN3-201ENST00000267970 ZNF215Q9UL58 517 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms