RNA–Protein interactions for RNA: ENST00000262055.8

LETMD1-201, Transcript of LETM1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETMD1, Length 2,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-201ENST00000262055 DNAJC18Q9H819 358 aa17.1■□□□□ 0.33
LETMD1-201ENST00000262055 COL2A1P02458 1487 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-201ENST00000262055 ZNF213O14771 459 aa17.09■□□□□ 0.33
LETMD1-201ENST00000262055 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
LETMD1-201ENST00000262055 ANAPC15P60006 121 aa17.09■□□□□ 0.33
LETMD1-201ENST00000262055 IMMTQ16891 758 aaKnown RBP17.09■□□□□ 0.33
LETMD1-201ENST00000262055 PNMA8AQ86V59 439 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-201ENST00000262055 ZSCAN29Q8IWY8 852 aaPredicted RBP17.09■□□□□ 0.33
LETMD1-201ENST00000262055 ANAPC4Q9UJX5 808 aa17.09■□□□□ 0.33
LETMD1-201ENST00000262055 NEDD4P46934 1319 aa17.08■□□□□ 0.33
LETMD1-201ENST00000262055 PITPNM2Q9BZ72 1349 aa17.08■□□□□ 0.33
LETMD1-201ENST00000262055 SSC5DA1L4H1 1573 aa17.08■□□□□ 0.33
LETMD1-201ENST00000262055 APOBEC3FQ8IUX4 373 aaKnown RBP17.08■□□□□ 0.33
LETMD1-201ENST00000262055 CSRNP1Q96S65 589 aa17.08■□□□□ 0.33
LETMD1-201ENST00000262055 ROBO3Q96MS0 1386 aa17.08■□□□□ 0.32
LETMD1-201ENST00000262055 E7EWF7 191 aa17.08■□□□□ 0.32
LETMD1-201ENST00000262055 PRDM1O75626 825 aa17.08■□□□□ 0.32
LETMD1-201ENST00000262055 UBE2HP62256 183 aa17.08■□□□□ 0.32
LETMD1-201ENST00000262055 GABPAQ06546 454 aa17.08■□□□□ 0.32
LETMD1-201ENST00000262055 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.32
LETMD1-201ENST00000262055 NBPF12Q5TAG4 269 aaPredicted RBP17.08■□□□□ 0.32
LETMD1-201ENST00000262055 MAP1SQ66K74 1059 aaPredicted RBP17.08■□□□□ 0.32
LETMD1-201ENST00000262055 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
LETMD1-201ENST00000262055 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.32
LETMD1-201ENST00000262055 FZD1Q9UP38 647 aa17.08■□□□□ 0.32
LETMD1-201ENST00000262055 GADD45BO75293 160 aaPredicted RBP17.07■□□□□ 0.32
LETMD1-201ENST00000262055 CPA1P15085 419 aa17.07■□□□□ 0.32
LETMD1-201ENST00000262055 TNFAIP1Q13829 316 aa17.07■□□□□ 0.32
LETMD1-201ENST00000262055 CHAMP1Q96JM3 812 aa17.07■□□□□ 0.32
LETMD1-201ENST00000262055 IRX3P78415 501 aaPredicted RBP17.06■□□□□ 0.32
LETMD1-201ENST00000262055 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 CCDC112Q8NEF3 446 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 DCPSQ96C86 337 aaKnown RBP17.06■□□□□ 0.32
LETMD1-201ENST00000262055 DHX36Q9H2U1 1008 aaKnown RBP17.06■□□□□ 0.32
LETMD1-201ENST00000262055 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
LETMD1-201ENST00000262055 TNNI2P48788 182 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 SHROOM1Q2M3G4 852 aaPredicted RBP17.06■□□□□ 0.32
LETMD1-201ENST00000262055 TSGA10IPQ3SY00 556 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 MIGA2Q7L4E1 593 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 STAG1Q8WVM7 1258 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 PI4KBQ9UBF8 816 aa17.06■□□□□ 0.32
LETMD1-201ENST00000262055 RRP1BQ14684 758 aaKnown RBP17.05■□□□□ 0.32
LETMD1-201ENST00000262055 C16orf86Q6ZW13 317 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 TTC6Q86TZ1 520 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 EFCC1Q9HA90 598 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 GPBP1L1Q9HC44 474 aaPredicted RBP17.05■□□□□ 0.32
LETMD1-201ENST00000262055 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 FGRP09769 529 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 CAPN2P17655 700 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 MCCP23508 829 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 SHMT1P34896 483 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 CDK8P49336 464 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 METTL16Q86W50 562 aaKnown RBP17.05■□□□□ 0.32
LETMD1-201ENST00000262055 SULF1Q8IWU6 871 aa17.05■□□□□ 0.32
LETMD1-201ENST00000262055 GREB1LQ9C091 1923 aaPredicted RBP17.04■□□□□ 0.32
LETMD1-201ENST00000262055 TRAF5O00463 557 aa17.04■□□□□ 0.32
LETMD1-201ENST00000262055 KIF3CO14782 793 aa17.04■□□□□ 0.32
LETMD1-201ENST00000262055 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
LETMD1-201ENST00000262055 NEK4P51957 841 aa17.04■□□□□ 0.32
LETMD1-201ENST00000262055 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
LETMD1-201ENST00000262055 EHD4Q9H223 541 aa17.04■□□□□ 0.32
LETMD1-201ENST00000262055 YY1AP1Q9H869 796 aa17.04■□□□□ 0.32
LETMD1-201ENST00000262055 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
LETMD1-201ENST00000262055 OTOFQ9HC10 1997 aa17.04■□□□□ 0.32
LETMD1-201ENST00000262055 B4E1Z4 1266 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 ZKSCAN1P17029 563 aaPredicted RBP17.03■□□□□ 0.32
LETMD1-201ENST00000262055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.03■□□□□ 0.32
LETMD1-201ENST00000262055 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 PLCD3Q8N3E9 789 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
LETMD1-201ENST00000262055 PAPPA2Q9BXP8 1791 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 RASA1P20936 1047 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 JAG1P78504 1218 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
LETMD1-201ENST00000262055 MFSD6Q6ZSS7 791 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 CHST3Q7LGC8 479 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 TEX2Q8IWB9 1127 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
LETMD1-201ENST00000262055 CHRM1P11229 460 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-201ENST00000262055 TNNT1P13805 278 aa17.02■□□□□ 0.32
LETMD1-201ENST00000262055 YY1P25490 414 aa17.02■□□□□ 0.32
LETMD1-201ENST00000262055 CYP2C19P33261 490 aa17.02■□□□□ 0.32
LETMD1-201ENST00000262055 FOXD4L5Q5VV16 416 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-201ENST00000262055 CYB5R4Q7L1T6 521 aa17.02■□□□□ 0.32
LETMD1-201ENST00000262055 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-201ENST00000262055 FOXD4L4Q8WXT5 416 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-201ENST00000262055 ANTXR2P58335 489 aa17.02■□□□□ 0.31
LETMD1-201ENST00000262055 MAP3K10Q02779 954 aa17.02■□□□□ 0.31
LETMD1-201ENST00000262055 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.31
LETMD1-201ENST00000262055 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.31
LETMD1-201ENST00000262055 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.31
LETMD1-201ENST00000262055 CRACR2BQ8N4Y2 399 aaPredicted RBP17.02■□□□□ 0.31
LETMD1-201ENST00000262055 CDCA5Q96FF9 252 aa17.02■□□□□ 0.31
LETMD1-201ENST00000262055 TOMM22Q9NS69 142 aa17.02■□□□□ 0.31
LETMD1-201ENST00000262055 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms