RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 KIF20AO95235 890 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 SIK1P57059 783 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 ARHGAP29Q52LW3 1261 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 DHX58Q96C10 678 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 CCDC34Q96HJ3 373 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 PARP3Q9Y6F1 533 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 hCG_1642624A0A1W2PR95 340 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 GOLGA6L9A6NEM1 432 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 WTIPA6NIX2 430 aaPredicted RBP17.38■□□□□ 0.37
DDX56-201ENST00000258772 PRDM1O75626 825 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 CT47A1Q5JQC4 288 aaPredicted RBP17.38■□□□□ 0.37
DDX56-201ENST00000258772 IFIT1BQ5T764 474 aaKnown RBP17.38■□□□□ 0.37
DDX56-201ENST00000258772 CATIPQ7Z7H3 387 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 LAMB2P55268 1798 aa17.38■□□□□ 0.37
DDX56-201ENST00000258772 CACNA1SQ13698 1873 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 COL4A1P02462 1669 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 CYP2D7A0A087X1C5 515 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 DYNLL1P63167 89 aaKnown RBP17.37■□□□□ 0.37
DDX56-201ENST00000258772 ITPK1Q13572 414 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 SH3RF1Q7Z6J0 888 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 FAM177A1Q8N128 213 aaPredicted RBP17.37■□□□□ 0.37
DDX56-201ENST00000258772 UBXN4Q92575 508 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
DDX56-201ENST00000258772 A0A1B0GTH6 734 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 FGRP09769 529 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 AFMP43652 599 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 CLCN6P51797 869 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 TROAPQ12815 778 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 TOGARAM2Q6ZUX3 1019 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
DDX56-201ENST00000258772 UBE4AQ14139 1066 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 IQCA1Q86XH1 822 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 MNS1Q8NEH6 495 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 SYMPKQ92797 1274 aaKnown RBP17.36■□□□□ 0.37
DDX56-201ENST00000258772 FERMT2Q96AC1 680 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 CICQ96RK0 1608 aaPredicted RBP17.36■□□□□ 0.37
DDX56-201ENST00000258772 WNT7AO00755 349 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 BMP15O95972 392 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
DDX56-201ENST00000258772 SPATA1Q5VX52 437 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 APTXQ7Z2E3 356 aaKnown RBP17.36■□□□□ 0.37
DDX56-201ENST00000258772 ANKRD18AQ8IVF6 992 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 WNK3Q9BYP7 1800 aa17.36■□□□□ 0.37
DDX56-201ENST00000258772 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
DDX56-201ENST00000258772 BAZ2BQ9UIF8 2168 aaKnown RBP17.35■□□□□ 0.37
DDX56-201ENST00000258772 TAF1P21675 1872 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 EFCAB8A8MWE9 144 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 TADA3O75528 432 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CALM1P0DP23 149 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CALM2P0DP24 149 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CALM3P0DP25 149 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
DDX56-201ENST00000258772 CUL4BQ13620 913 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 WDR24Q96S15 920 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CARD6Q9BX69 1037 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 TEX33O43247 280 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CASP1P29466 404 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CASQ1P31415 396 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 GNG11P61952 73 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 DPYDQ12882 1025 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 ZNF174Q15697 407 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 NPY5RQ15761 445 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CAVIN4Q5BKX8 364 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 CTR9Q6PD62 1173 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 ZNF384Q8TF68 577 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 TNFRSF25Q93038 417 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 GSDMAQ96QA5 445 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 BRMS1Q9HCU9 246 aa17.35■□□□□ 0.37
DDX56-201ENST00000258772 PCP11498 1178 aaKnown RBP17.34■□□□□ 0.37
DDX56-201ENST00000258772 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
DDX56-201ENST00000258772 DDB1Q16531 1140 aa17.34■□□□□ 0.37
DDX56-201ENST00000258772 KLHL10Q6JEL2 608 aa17.34■□□□□ 0.37
DDX56-201ENST00000258772 RREB1Q92766 1687 aa17.34■□□□□ 0.37
DDX56-201ENST00000258772 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
DDX56-201ENST00000258772 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
DDX56-201ENST00000258772 AKR1B15C9JRZ8 316 aaPredicted RBP17.33■□□□□ 0.37
DDX56-201ENST00000258772 STX17P56962 302 aa17.33■□□□□ 0.37
DDX56-201ENST00000258772 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.37
DDX56-201ENST00000258772 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.37
DDX56-201ENST00000258772 TMTC3Q6ZXV5 915 aa17.33■□□□□ 0.37
DDX56-201ENST00000258772 CDCA7Q9BWT1 371 aaPredicted RBP17.33■□□□□ 0.37
DDX56-201ENST00000258772 ZNF652Q9Y2D9 606 aa17.33■□□□□ 0.37
DDX56-201ENST00000258772 FHOD1Q9Y613 1164 aa17.33■□□□□ 0.37
DDX56-201ENST00000258772 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.37
DDX56-201ENST00000258772 USP17L12C9JPN9 530 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 USP17L21D6R901 530 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 DDAH1O94760 285 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
DDX56-201ENST00000258772 TERF2Q15554 542 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 TTC38Q5R3I4 469 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 PANX2Q96RD6 677 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 MINPP1Q9UNW1 487 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 A0A1B0GUL6 1792 aa17.33■□□□□ 0.36
DDX56-201ENST00000258772 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms