RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 NACC1Q96RE7 527 aa6.44□□□□□ -1.38
HMGB1P5-201ENST00000255320 FOXQ1Q9C009 403 aa6.44□□□□□ -1.38
HMGB1P5-201ENST00000255320 SEMA6CQ9H3T2 930 aa6.44□□□□□ -1.38
HMGB1P5-201ENST00000255320 PCOLCE2Q9UKZ9 415 aa6.44□□□□□ -1.38
HMGB1P5-201ENST00000255320 COL17A1Q9UMD9 1497 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 KRBA1A5PL33 1030 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 C9orf172C9J069 976 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 GAS2O43903 313 aaKnown RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 PMS1P54277 932 aaKnown RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 SLC7A5Q01650 507 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 IFRD2Q12894 506 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 MTERF2Q49AM1 385 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 SGO2Q562F6 1265 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 KIAA1211LQ6NV74 962 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 SPATC1Q76KD6 591 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 DZIP1LQ8IYY4 767 aaKnown RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 DNAJB8Q8NHS0 232 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 SH3TC2Q8TF17 1288 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 XAGE3Q8WTP9 111 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 EZH1Q92800 747 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 SCARF2Q96GP6 870 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 MEGF10Q96KG7 1140 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 CCDC74BQ96LY2 380 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 PSMG3-AS1Q96PY0 264 aa6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 SUCOQ9UBS9 1254 aaKnown RBP6.43□□□□□ -1.38
HMGB1P5-201ENST00000255320 C9IYK1 514 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 DYNC1LI2O43237 492 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 SART1O43290 800 aaKnown RBP6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 SUSD5O60279 629 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 DIAPH1O60610 1272 aaKnown RBP6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 UVSSAQ2YD98 709 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 SLC10A6Q3KNW5 377 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 TDRD10Q5VZ19 366 aaKnown RBP6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 SEZ6L2Q6UXD5 910 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 ZNF662Q6ZS27 426 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 ARMC10Q8N2F6 343 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 JMYQ8N9B5 988 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 MFSD2AQ8NA29 543 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 FBLIM1Q8WUP2 373 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 ZNF669Q96BR6 464 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 MYRFLQ96LU7 910 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 SSU72Q9NP77 194 aaKnown RBP6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 ZMYM5Q9UJ78 669 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 DAGLAQ9Y4D2 1042 aa6.42□□□□□ -1.38
HMGB1P5-201ENST00000255320 APBA3O96018 575 aa6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 NFICP08651 508 aa6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 HSD3B2P26439 372 aa6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 GBP1P32455 592 aa6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 INSM1Q01101 510 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 GNPTABQ3T906 1256 aa6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 C2orf27AQ580R0 203 aa6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 SUSD2Q9UGT4 822 aa6.41□□□□□ -1.38
HMGB1P5-201ENST00000255320 CBFA2T2O43439 604 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 CLEC3AO75596 197 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 SLITRK5O94991 958 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 USP11P51784 963 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 SQSTM1Q13501 440 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 BBS9Q3SYG4 887 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 ALYREFQ86V81 257 aaKnown RBP6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 TXNRD3Q86VQ6 643 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 UTP4Q969X6 686 aaKnown RBP6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 VWCEQ96DN2 955 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 DHRS1Q96LJ7 313 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 MIPEPQ99797 713 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 FAM86C1Q9NVL1 165 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 TMEM260Q9NX78 707 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 PFDN2Q9UHV9 154 aa6.4□□□□□ -1.38
HMGB1P5-201ENST00000255320 SHOXO15266 292 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 AXDND1Q5T1B0 1012 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 LETMD1Q6P1Q0 360 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 FAM20CQ8IXL6 584 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 RIN3Q8TB24 985 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 SMARCC1Q92922 1105 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 ZNF512BQ96KM6 892 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 HAUS7Q99871 368 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 EPN3Q9H201 632 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 LGR6Q9HBX8 967 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 C1GALT1Q9NS00 363 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 LEMD3Q9Y2U8 911 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 KDM2BQ8NHM5 1336 aa6.39□□□□□ -1.39
HMGB1P5-201ENST00000255320 ESYT3A0FGR9 886 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 RBAK-RBAKDNI3L0D1 243 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 ADCY3O60266 1144 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 TP53P04637 393 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 EPHX1P07099 455 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 BMP3P12645 472 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 MAP4P27816 1152 aaKnown RBP6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 CHRNA4P43681 627 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 ZNF143P52747 638 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 SSRP1Q08945 709 aaKnown RBP6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 CDK5R2Q13319 367 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 NBPF12Q5TAG4 269 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 DCAF15Q66K64 600 aa6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 ZNF513Q8N8E2 541 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P5-201ENST00000255320 THAP3Q8WTV1 239 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms