RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 FOSBP53539 338 aa14.19□□□□□ -0.14
NIP7-201ENST00000254940 FGD1P98174 961 aa14.19□□□□□ -0.14
NIP7-201ENST00000254940 CCDC144CPQ8IYA2 1237 aa14.19□□□□□ -0.14
NIP7-201ENST00000254940 MB21D2Q8IYB1 491 aaPredicted RBP14.19□□□□□ -0.14
NIP7-201ENST00000254940 ANAPC4Q9UJX5 808 aa14.19□□□□□ -0.14
NIP7-201ENST00000254940 ZMYM6O95789 1325 aa14.19□□□□□ -0.14
NIP7-201ENST00000254940 PRPF40AO75400 957 aaKnown RBP14.19□□□□□ -0.14
NIP7-201ENST00000254940 INTS4Q96HW7 963 aaKnown RBP14.19□□□□□ -0.14
NIP7-201ENST00000254940 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.19□□□□□ -0.14
NIP7-201ENST00000254940 IL17RBQ9NRM6 502 aa14.19□□□□□ -0.14
NIP7-201ENST00000254940 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
NIP7-201ENST00000254940 BRD1O95696 1058 aa14.18□□□□□ -0.14
NIP7-201ENST00000254940 GJB2P29033 226 aa14.18□□□□□ -0.14
NIP7-201ENST00000254940 CCT2P78371 535 aaKnown RBP14.18□□□□□ -0.14
NIP7-201ENST00000254940 ABCB5Q2M3G0 1257 aa14.18□□□□□ -0.14
NIP7-201ENST00000254940 CST9Q5W186 159 aa14.18□□□□□ -0.14
NIP7-201ENST00000254940 FOXP4Q8IVH2 680 aaPredicted RBP14.18□□□□□ -0.14
NIP7-201ENST00000254940 LRRC47Q8N1G4 583 aaKnown RBP14.18□□□□□ -0.14
NIP7-201ENST00000254940 ELP3Q9H9T3 547 aa14.18□□□□□ -0.14
NIP7-201ENST00000254940 PHF20L1A8MW92 1017 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
NIP7-201ENST00000254940 SYT1P21579 422 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 PSMA5P28066 241 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 SUPT20HL1Q3ZLR7 823 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
NIP7-201ENST00000254940 ESR2Q92731 530 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 CEP95Q96GE4 821 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 DDX11L8A8MPP1 907 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
NIP7-201ENST00000254940 KCNA4P22459 653 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 GUCY1A2P33402 732 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 ECE1P42892 770 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 TSGA10IPQ3SY00 556 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 RNF41Q9H4P4 317 aaPredicted RBP14.17□□□□□ -0.14
NIP7-201ENST00000254940 ISY1Q9ULR0 285 aaKnown RBP14.17□□□□□ -0.14
NIP7-201ENST00000254940 ROBO3Q96MS0 1386 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 ATAD5Q96QE3 1844 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 OTOFQ9HC10 1997 aa14.17□□□□□ -0.14
NIP7-201ENST00000254940 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
NIP7-201ENST00000254940 VGLL4Q14135 290 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 TMEM67Q5HYA8 995 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 ACER1Q8TDN7 264 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 ZNF341Q9BYN7 854 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 EHD4Q9H223 541 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 BAZ2BQ9UIF8 2168 aaKnown RBP14.16□□□□□ -0.14
NIP7-201ENST00000254940 CEP350Q5VT06 3117 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 TNKSO95271 1327 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 NCLP19338 710 aaKnown RBP14.16□□□□□ -0.14
NIP7-201ENST00000254940 NF2P35240 595 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 TATDN1Q6P1N9 297 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 SPICE1Q8N0Z3 855 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 DDX11Q96FC9 970 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 UBAC1Q9BSL1 405 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 KRT23Q9C075 422 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 CLIP2Q9UDT6 1046 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 BRPF3Q9ULD4 1205 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 SMC3Q9UQE7 1217 aa14.16□□□□□ -0.14
NIP7-201ENST00000254940 ORC4O43929 436 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 MCM5P33992 734 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 FAM173BQ6P4H8 233 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 NFXL1Q6ZNB6 911 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.15□□□□□ -0.14
NIP7-201ENST00000254940 DHX32Q7L7V1 743 aaKnown RBP14.15□□□□□ -0.14
NIP7-201ENST00000254940 ENAHQ8N8S7 591 aaPredicted RBP14.15□□□□□ -0.14
NIP7-201ENST00000254940 KLRG1Q96E93 195 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 LMBRD1Q9NUN5 540 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 HERC5Q9UII4 1024 aaKnown RBP14.15□□□□□ -0.14
NIP7-201ENST00000254940 ZBTB21Q9ULJ3 1066 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 TRIM75PA6NK02 468 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
NIP7-201ENST00000254940 CAP2P40123 477 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 DCAF15Q66K64 600 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 ZSCAN10Q96SZ4 725 aaPredicted RBP14.15□□□□□ -0.14
NIP7-201ENST00000254940 SWAP70Q9UH65 585 aa14.15□□□□□ -0.14
NIP7-201ENST00000254940 EEF2P13639 858 aaKnown RBP14.14□□□□□ -0.15
NIP7-201ENST00000254940 SCRN1Q12765 414 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 KRT32Q14532 448 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
NIP7-201ENST00000254940 FERMT3Q86UX7 667 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 CMTR1Q8N1G2 835 aaKnown RBP14.14□□□□□ -0.15
NIP7-201ENST00000254940 OTUD5Q96G74 571 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 CPVLQ9H3G5 476 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 CNNM2Q9H8M5 875 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 GBA2Q9HCG7 927 aaPredicted RBP14.14□□□□□ -0.15
NIP7-201ENST00000254940 GJB4Q9NTQ9 266 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 PPP2R3BQ9Y5P8 575 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 DDX49Q9Y6V7 483 aaKnown RBP14.14□□□□□ -0.15
NIP7-201ENST00000254940 MYH4Q9Y623 1939 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 A0A1W2PRG0 241 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 FGRP09769 529 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 CLEC17AQ6ZS10 378 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 NUP133Q8WUM0 1156 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 NUP88Q99567 741 aaPredicted RBP14.14□□□□□ -0.15
NIP7-201ENST00000254940 RBM27Q9P2N5 1060 aaKnown RBP14.14□□□□□ -0.15
NIP7-201ENST00000254940 ZHX2Q9Y6X8 837 aa14.14□□□□□ -0.15
NIP7-201ENST00000254940 STX6O43752 255 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 TOMM70O94826 608 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 CTDNEP1O95476 244 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 SIAH1Q8IUQ4 282 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 SMC1BQ8NDV3 1235 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 719 ms