RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NCOA7Q8NI08 942 aa19.45■□□□□ 0.7
FOXA1-201ENST00000250448 HSD3B7Q9H2F3 369 aa19.45■□□□□ 0.7
FOXA1-201ENST00000250448 B4E1Z4 1266 aa19.45■□□□□ 0.7
FOXA1-201ENST00000250448 ETF1P62495 437 aaKnown RBP19.45■□□□□ 0.7
FOXA1-201ENST00000250448 BMS1Q14692 1282 aaKnown RBP19.45■□□□□ 0.7
FOXA1-201ENST00000250448 SLC39A14Q15043 492 aa19.45■□□□□ 0.7
FOXA1-201ENST00000250448 TUBE1Q9UJT0 475 aa19.45■□□□□ 0.7
FOXA1-201ENST00000250448 MARCKSP29966 332 aaPredicted RBP19.44■□□□□ 0.7
FOXA1-201ENST00000250448 DOK7Q18PE1 504 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 ISM2Q6H9L7 571 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 UTRNP46939 3433 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 MINDY4BA8MYZ0 360 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 H0YIN7 160 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 CBFA2T2O43439 604 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 ALDH1B1P30837 517 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 SYKP43405 635 aa19.44■□□□□ 0.7
FOXA1-201ENST00000250448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.44■□□□□ 0.7
FOXA1-201ENST00000250448 WDR19Q8NEZ3 1342 aa19.43■□□□□ 0.7
FOXA1-201ENST00000250448 LDHBP07195 334 aaKnown RBP19.43■□□□□ 0.7
FOXA1-201ENST00000250448 CLCN6P51797 869 aa19.43■□□□□ 0.7
FOXA1-201ENST00000250448 RRP12Q5JTH9 1297 aaKnown RBP19.43■□□□□ 0.7
FOXA1-201ENST00000250448 DPP8Q6V1X1 898 aaPredicted RBP19.43■□□□□ 0.7
FOXA1-201ENST00000250448 CYB5R4Q7L1T6 521 aa19.43■□□□□ 0.7
FOXA1-201ENST00000250448 ST7Q9NRC1 585 aa19.43■□□□□ 0.7
FOXA1-201ENST00000250448 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
FOXA1-201ENST00000250448 MYL5Q02045 173 aa19.43■□□□□ 0.7
FOXA1-201ENST00000250448 DNAI1Q9UI46 699 aa19.43■□□□□ 0.7
FOXA1-201ENST00000250448 ARHGAP29Q52LW3 1261 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 TEX2Q8IWB9 1127 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 RGS22Q8NE09 1264 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 DPF2Q92785 391 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 HPSEQ9Y251 543 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 UBASH3AP57075 661 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 MXD3Q9BW11 206 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 BAZ2AQ9UIF9 1905 aaKnown RBP19.42■□□□□ 0.7
FOXA1-201ENST00000250448 WDR66Q8TBY9 1149 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 NACAP1Q9BZK3 213 aa19.42■□□□□ 0.7
FOXA1-201ENST00000250448 SRCAPQ6ZRS2 3230 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 ECM29Q5VYK3 1845 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 CHD4Q14839 1912 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 SERPINC1P01008 464 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 FAM193AP78312 1265 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 GTF2IP78347 998 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 TRDNQ13061 729 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 ALX1Q15699 326 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 C15orf52Q6ZUT6 534 aaKnown RBP19.41■□□□□ 0.7
FOXA1-201ENST00000250448 SENP2Q9HC62 589 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 FHOD1Q9Y613 1164 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 ZMYM6O95789 1325 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 PDS5AQ29RF7 1337 aaKnown RBP19.41■□□□□ 0.7
FOXA1-201ENST00000250448 GNAT2P19087 354 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 TRIM65Q6PJ69 517 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 JMYQ8N9B5 988 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 AIFM3Q96NN9 605 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 ALG1Q9BT22 464 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 TMX1Q9H3N1 280 aa19.41■□□□□ 0.7
FOXA1-201ENST00000250448 SLX4Q8IY92 1834 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 PPP6R2O75170 966 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 CFAP100Q494V2 611 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 SHC4Q6S5L8 630 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 CREBRFQ8IUR6 639 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 VSTM4Q8IW00 320 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 LRRC37AA6NMS7 1700 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 LTBP1Q14766 1721 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 F8W031 263 aaPredicted RBP19.4■□□□□ 0.7
FOXA1-201ENST00000250448 IL1R1P14778 569 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 PNOCQ13519 176 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 MFSD14BQ5SR56 506 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 ZKSCAN3Q9BRR0 538 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 ZC3H12CQ9C0D7 883 aaKnown RBP19.4■□□□□ 0.7
FOXA1-201ENST00000250448 DUOX1Q9NRD9 1551 aa19.4■□□□□ 0.7
FOXA1-201ENST00000250448 CCDC66A2RUB6 948 aa19.39■□□□□ 0.7
FOXA1-201ENST00000250448 SRRTQ9BXP5 876 aaKnown RBP19.39■□□□□ 0.7
FOXA1-201ENST00000250448 KCNQ5Q9NR82 932 aa19.39■□□□□ 0.7
FOXA1-201ENST00000250448 FAM237AA0A1B0GTK4 181 aa19.39■□□□□ 0.69
FOXA1-201ENST00000250448 PNMA6AP0CW24 399 aaPredicted RBP19.39■□□□□ 0.69
FOXA1-201ENST00000250448 PTPAQ15257 358 aa19.39■□□□□ 0.69
FOXA1-201ENST00000250448 TMC4Q7Z404 712 aa19.39■□□□□ 0.69
FOXA1-201ENST00000250448 FCHSD1Q86WN1 690 aa19.39■□□□□ 0.69
FOXA1-201ENST00000250448 MNS1Q8NEH6 495 aa19.39■□□□□ 0.69
FOXA1-201ENST00000250448 UBXN4Q92575 508 aa19.39■□□□□ 0.69
FOXA1-201ENST00000250448 ARGLU1Q9NWB6 273 aaPredicted RBP19.39■□□□□ 0.69
FOXA1-201ENST00000250448 SPTY2D1Q68D10 685 aaPredicted RBP19.38■□□□□ 0.69
FOXA1-201ENST00000250448 KRT40Q6A162 431 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 REXO1L1PQ8IX06 675 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 DBNDD1Q9H9R9 158 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 MYO1BO43795 1136 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 PRDM1O75626 825 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 CYP2D6P10635 497 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 TOP1P11387 765 aaKnown RBP19.38■□□□□ 0.69
FOXA1-201ENST00000250448 RXRAP19793 462 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 PPARAQ07869 468 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 RESP18Q5W5W9 173 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 TMX4Q9H1E5 349 aaPredicted RBP19.38■□□□□ 0.69
FOXA1-201ENST00000250448 ANGEL1Q9UNK9 670 aaKnown RBP19.38■□□□□ 0.69
FOXA1-201ENST00000250448 CCDC88AQ3V6T2 1871 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 TADA3O75528 432 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 CDKL5O76039 1030 aa19.38■□□□□ 0.69
FOXA1-201ENST00000250448 METAP2P50579 478 aaKnown RBP eCLIP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms