RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF213O14771 459 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 MCMDC2Q4G0Z9 681 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 MMRN2Q9H8L6 949 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 A0A0G2JS52 829 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 TXNDC9O14530 226 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 STAMBPO95630 424 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 MDH1P40925 334 aaKnown RBP14.26□□□□□ -0.13
VAMP4-201ENST00000236192 KLC1Q07866 573 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 MSANTD4Q8NCY6 345 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 KCNV2Q8TDN2 545 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 OLFM3Q96PB7 478 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 LSG1Q9H089 658 aaKnown RBP14.26□□□□□ -0.13
VAMP4-201ENST00000236192 GUCY1A3Q02108 690 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 RSRC2Q7L4I2 434 aaKnown RBP14.26□□□□□ -0.13
VAMP4-201ENST00000236192 CFAP57Q96MR6 1250 aa14.26□□□□□ -0.13
VAMP4-201ENST00000236192 RTEL1-TNFRSF6BF6WH68 1400 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 EIF4E1BA6NMX2 242 aaKnown RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 TAB2Q9NYJ8 693 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 KIAA0586Q9BVV6 1533 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 BICDL2A1A5D9 508 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 KRT18P05783 430 aaKnown RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 ATP1A3P13637 1013 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 PLCD1P51178 756 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 RNASE9P60153 205 aaKnown RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 KCNB1Q14721 858 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 CCDC93Q567U6 631 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 NAA35Q5VZE5 725 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 TRIM42Q8IWZ5 723 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 REXO1L1PQ8IX06 675 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 RRP36Q96EU6 259 aaKnown RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 EPB41L5Q9HCM4 733 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 KCND1Q9NSA2 647 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 CCDC169A6NNP5 214 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 PDHBP11177 359 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 LSP1P33241 339 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 BIRC3Q13489 604 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 ATP6V1G3Q96LB4 118 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 MOV10L1Q9BXT6 1211 aaKnown RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 BCORL1Q5H9F3 1711 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 PRG4Q92954 1404 aaPredicted RBP14.25□□□□□ -0.13
VAMP4-201ENST00000236192 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 C21orf2O43822 256 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 IRX4P78413 519 aa14.25□□□□□ -0.13
VAMP4-201ENST00000236192 HEXIM1O94992 359 aaKnown RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 STX2P32856 288 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 RFC1P35251 1148 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 MAP7D3Q8IWC1 876 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 GFM2Q969S9 779 aaKnown RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 PGBD1Q96JS3 809 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 hCG_2014768A0A024R1R8 64 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 MAP2K7O14733 419 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 AMPD3Q01432 767 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 TMEM154Q6P9G4 183 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 GSPT2Q8IYD1 628 aaKnown RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 KLHL33A6NCF5 533 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 TPD52L2O43399 206 aaKnown RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 MAGEA1P43355 309 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 TTF1Q15361 905 aaPredicted RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 PTPN21Q16825 1174 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 GLE1Q53GS7 698 aaKnown RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 SOGA3Q5TF21 947 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 POLR2DO15514 142 aaKnown RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 TBC1D8BQ0IIM8 1120 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 PAK1Q13153 545 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 ZC3H18Q86VM9 953 aaKnown RBP14.24□□□□□ -0.13
VAMP4-201ENST00000236192 LZICQ8WZA0 190 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 SUGCTQ9HAC7 445 aa14.24□□□□□ -0.13
VAMP4-201ENST00000236192 FYB1O15117 783 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 ANP32DO95626 131 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 FAM107AO95990 144 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
VAMP4-201ENST00000236192 SFSWAPQ12872 951 aaKnown RBP14.23□□□□□ -0.13
VAMP4-201ENST00000236192 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
VAMP4-201ENST00000236192 LRRN4CLQ8ND94 238 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 FAM81AQ8TBF8 368 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 RIN2Q8WYP3 895 aaPredicted RBP14.23□□□□□ -0.13
VAMP4-201ENST00000236192 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.23□□□□□ -0.13
VAMP4-201ENST00000236192 STOML1Q9UBI4 398 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 NOVA2Q9UNW9 492 aaKnown RBP14.23□□□□□ -0.13
VAMP4-201ENST00000236192 FAM83GA6ND36 823 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 RESTQ13127 1097 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 BEND3Q5T5X7 828 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 TCERG1LQ5VWI1 586 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 SPATA1Q5VX52 437 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 MGARPQ8TDB4 240 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 EXOC1Q9NV70 894 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 MYSM1Q5VVJ2 828 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 PPP4R3AQ6IN85 833 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 C3orf20Q8ND61 904 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 NACAP1Q9BZK3 213 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 RAB17Q9H0T7 212 aa14.23□□□□□ -0.13
VAMP4-201ENST00000236192 Q9H521 79 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms