RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 ZBTB43O43298 467 aa25.68■■□□□ 1.7
HOXC8-201ENST00000040584 NCLP19338 710 aaKnown RBP25.68■■□□□ 1.7
HOXC8-201ENST00000040584 TNFAIP1Q13829 316 aa25.68■■□□□ 1.7
HOXC8-201ENST00000040584 RCSD1Q6JBY9 416 aa25.68■■□□□ 1.7
HOXC8-201ENST00000040584 RRAGDQ9NQL2 400 aaPredicted RBP25.68■■□□□ 1.7
HOXC8-201ENST00000040584 PGAP2Q9UHJ9 254 aa25.68■■□□□ 1.7
HOXC8-201ENST00000040584 NASPP49321 788 aaPredicted RBP25.68■■□□□ 1.7
HOXC8-201ENST00000040584 ANGEL2Q5VTE6 544 aaKnown RBP25.68■■□□□ 1.7
HOXC8-201ENST00000040584 SYNE3Q6ZMZ3 975 aa25.68■■□□□ 1.7
HOXC8-201ENST00000040584 CCDC144CPQ8IYA2 1237 aa25.68■■□□□ 1.7
HOXC8-201ENST00000040584 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.68■■□□□ 1.7
HOXC8-201ENST00000040584 MYH8P13535 1937 aa25.68■■□□□ 1.7
HOXC8-201ENST00000040584 METAP2P50579 478 aaKnown RBP eCLIP25.67■■□□□ 1.7
HOXC8-201ENST00000040584 ZSCAN23Q3MJ62 389 aa25.67■■□□□ 1.7
HOXC8-201ENST00000040584 ZNF654Q8IZM8 581 aa25.67■■□□□ 1.7
HOXC8-201ENST00000040584 PPP1R9BQ96SB3 815 aa25.67■■□□□ 1.7
HOXC8-201ENST00000040584 ADARB2Q9NS39 739 aaKnown RBP25.67■■□□□ 1.7
HOXC8-201ENST00000040584 ZC3H4Q9UPT8 1303 aaKnown RBP25.67■■□□□ 1.7
HOXC8-201ENST00000040584 CAVIN1Q6NZI2 390 aaKnown RBP25.66■■□□□ 1.7
HOXC8-201ENST00000040584 TATDN1Q6P1N9 297 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 DGKHQ86XP1 1220 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 LLPHQ9BRT6 129 aaKnown RBP25.66■■□□□ 1.7
HOXC8-201ENST00000040584 WDR33Q9C0J8 1336 aaKnown RBP25.66■■□□□ 1.7
HOXC8-201ENST00000040584 GLTPD2A6NH11 291 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 GJB2P29033 226 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 CERKLQ49MI3 558 aaPredicted RBP25.66■■□□□ 1.7
HOXC8-201ENST00000040584 CCDC178Q5BJE1 867 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 CEP95Q96GE4 821 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 DEFB129Q9H1M3 183 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.66■■□□□ 1.7
HOXC8-201ENST00000040584 HERC5Q9UII4 1024 aaKnown RBP25.66■■□□□ 1.7
HOXC8-201ENST00000040584 TAOK2Q9UL54 1235 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 STX8Q9UNK0 236 aa25.66■■□□□ 1.7
HOXC8-201ENST00000040584 MPHOSPH10O00566 681 aaKnown RBP25.65■■□□□ 1.7
HOXC8-201ENST00000040584 JAK2O60674 1132 aa25.65■■□□□ 1.7
HOXC8-201ENST00000040584 CTDNEP1O95476 244 aa25.65■■□□□ 1.7
HOXC8-201ENST00000040584 NUP133Q8WUM0 1156 aa25.65■■□□□ 1.7
HOXC8-201ENST00000040584 ANKS1AQ92625 1134 aa25.65■■□□□ 1.7
HOXC8-201ENST00000040584 CHMP4CQ96CF2 233 aa25.65■■□□□ 1.7
HOXC8-201ENST00000040584 L3MBTL3Q96JM7 780 aaPredicted RBP25.65■■□□□ 1.7
HOXC8-201ENST00000040584 TEPSINQ96N21 525 aa25.65■■□□□ 1.7
HOXC8-201ENST00000040584 GGA3Q9NZ52 723 aa25.65■■□□□ 1.7
HOXC8-201ENST00000040584 GOLGA8AA7E2F4 631 aa25.64■■□□□ 1.7
HOXC8-201ENST00000040584 ADD1P35611 737 aaKnown RBP25.64■■□□□ 1.7
HOXC8-201ENST00000040584 SHROOM1Q2M3G4 852 aaPredicted RBP25.64■■□□□ 1.7
HOXC8-201ENST00000040584 MIGA2Q7L4E1 593 aa25.64■■□□□ 1.7
HOXC8-201ENST00000040584 CATIPQ7Z7H3 387 aa25.64■■□□□ 1.7
HOXC8-201ENST00000040584 CCDC17Q96LX7 622 aa25.64■■□□□ 1.7
HOXC8-201ENST00000040584 PLIN4Q96Q06 1357 aa25.64■■□□□ 1.69
HOXC8-201ENST00000040584 PPFIA3O75145 1194 aa25.64■■□□□ 1.69
HOXC8-201ENST00000040584 CDC27P30260 824 aa25.64■■□□□ 1.69
HOXC8-201ENST00000040584 NSUN7Q8NE18 718 aaKnown RBP25.64■■□□□ 1.69
HOXC8-201ENST00000040584 SMARCC2Q8TAQ2 1214 aa25.64■■□□□ 1.69
HOXC8-201ENST00000040584 NID2Q14112 1375 aa25.63■■□□□ 1.69
HOXC8-201ENST00000040584 RCAN1P53805 252 aa25.63■■□□□ 1.69
HOXC8-201ENST00000040584 RRP1BQ14684 758 aaKnown RBP25.63■■□□□ 1.69
HOXC8-201ENST00000040584 APOBEC3FQ8IUX4 373 aaKnown RBP25.63■■□□□ 1.69
HOXC8-201ENST00000040584 KAT14Q9H8E8 782 aa25.63■■□□□ 1.69
HOXC8-201ENST00000040584 FAM217BQ9NTX9 383 aaPredicted RBP25.63■■□□□ 1.69
HOXC8-201ENST00000040584 IGKV6D-41A0A0C4DH26 115 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 DHX16O60231 1041 aaKnown RBP25.62■■□□□ 1.69
HOXC8-201ENST00000040584 CLEC10AQ8IUN9 316 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 SYAP1Q96A49 352 aaPredicted RBP25.62■■□□□ 1.69
HOXC8-201ENST00000040584 TMEM47Q9BQJ4 181 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 MTMR4Q9NYA4 1195 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 GDF11O95390 407 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 TROAPQ12815 778 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 FANCBQ8NB91 859 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 DDX11Q96FC9 970 aa25.62■■□□□ 1.69
HOXC8-201ENST00000040584 PTPDC1A2A3K4 754 aa25.61■■□□□ 1.69
HOXC8-201ENST00000040584 ESPNB1AK53 854 aa25.61■■□□□ 1.69
HOXC8-201ENST00000040584 CPLX1O14810 134 aa25.61■■□□□ 1.69
HOXC8-201ENST00000040584 TBC1D12O60347 775 aa25.61■■□□□ 1.69
HOXC8-201ENST00000040584 PDIA4P13667 645 aaKnown RBP25.61■■□□□ 1.69
HOXC8-201ENST00000040584 RTN1Q16799 776 aa25.61■■□□□ 1.69
HOXC8-201ENST00000040584 GPT2Q8TD30 523 aa25.61■■□□□ 1.69
HOXC8-201ENST00000040584 NOVP48745 357 aa25.6■■□□□ 1.69
HOXC8-201ENST00000040584 PNMA1Q8ND90 353 aa25.6■■□□□ 1.69
HOXC8-201ENST00000040584 DDAH1O94760 285 aa25.6■■□□□ 1.69
HOXC8-201ENST00000040584 JAG1P78504 1218 aa25.6■■□□□ 1.69
HOXC8-201ENST00000040584 ABCB5Q2M3G0 1257 aa25.6■■□□□ 1.69
HOXC8-201ENST00000040584 PRAMEF18Q5VWM3 479 aa25.6■■□□□ 1.69
HOXC8-201ENST00000040584 SYT1P21579 422 aa25.59■■□□□ 1.69
HOXC8-201ENST00000040584 EPHX2P34913 555 aa25.59■■□□□ 1.69
HOXC8-201ENST00000040584 NBPF12Q5TAG4 269 aaPredicted RBP25.59■■□□□ 1.69
HOXC8-201ENST00000040584 CALM1P0DP23 149 aa25.58■■□□□ 1.69
HOXC8-201ENST00000040584 CALM2P0DP24 149 aa25.58■■□□□ 1.69
HOXC8-201ENST00000040584 CALM3P0DP25 149 aa25.58■■□□□ 1.69
HOXC8-201ENST00000040584 HMGN5P82970 282 aaKnown RBP25.58■■□□□ 1.69
HOXC8-201ENST00000040584 MAP3K10Q02779 954 aa25.58■■□□□ 1.69
HOXC8-201ENST00000040584 LRSAM1Q6UWE0 723 aa25.58■■□□□ 1.69
HOXC8-201ENST00000040584 MTMR7Q9Y216 660 aa25.58■■□□□ 1.69
HOXC8-201ENST00000040584 GH2P01242 217 aa25.57■■□□□ 1.68
HOXC8-201ENST00000040584 TOP1P11387 765 aaKnown RBP25.57■■□□□ 1.68
HOXC8-201ENST00000040584 SEPT2Q15019 361 aa25.57■■□□□ 1.68
HOXC8-201ENST00000040584 NTRK3Q16288 839 aa25.57■■□□□ 1.68
HOXC8-201ENST00000040584 HS1BP3Q53T59 392 aa25.57■■□□□ 1.68
HOXC8-201ENST00000040584 CLIP2Q9UDT6 1046 aa25.57■■□□□ 1.68
HOXC8-201ENST00000040584 GREB1LQ9C091 1923 aaPredicted RBP25.57■■□□□ 1.68
HOXC8-201ENST00000040584 TTLL1O95922 423 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms