RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Itgb4A2A863 1818 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ccdc6D3YZP9 469 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Prl2c1Q5SVL9 228 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ces3aQ63880 571 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Dnaaf2Q8BPI1 814 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ces3bQ8VCU1 571 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Xrcc4Q924T3 326 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ripk4Q9ERK0 786 aa18.22■□□□□ 0.51
Trim39-203ENSMUST00000113706 CebpzP53569 1052 aaKnown RBP18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Eef2P58252 858 aaKnown RBP18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Fbxo41Q6NS60 873 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Gpr101Q80T62 511 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Trmt2aQ8BNV1 574 aaKnown RBP18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Psme4Q5SSW2 1843 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Pfkfb3A7UAK5 555 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ifi207E9Q3L4 978 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Vmn2r68L7N2B3 851 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Tacc1Q6Y685 774 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 IarsQ8BU30 1262 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ktn1Q61595 1327 aaKnown RBP18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Ccdc85cE9Q6B2 420 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Grin1P35438 938 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 EgfrQ01279 1210 aa18.21■□□□□ 0.51
Trim39-203ENSMUST00000113706 Zfp646Q6NV66 1788 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Alppl2P24823 529 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ncbp1Q3UYV9 790 aaKnown RBP18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Map3k12Q60700 888 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ano6Q6P9J9 911 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Znf653Q6YND2 615 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Epha10Q8BYG9 1007 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Tlcd1Q99JT6 247 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Hic2Q9JLZ6 619 aaKnown RBP18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Zscan18E9PUD6 809 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ces1aE9PYP1 563 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Lmnb1P14733 588 aaKnown RBP18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Usp5P56399 858 aaKnown RBP18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Klhdc9Q3USL1 350 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Mars2Q499X9 586 aaKnown RBP18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 ErfeQ6PGN1 340 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 KhnynQ80U38 671 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Stac3Q8BZ71 360 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Rec8Q8C5S7 591 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Inpp5bQ8K337 993 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Kcnk13Q8R1P5 405 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Klrc1Q9Z202 244 aa18.2■□□□□ 0.5
Trim39-203ENSMUST00000113706 Phldb3E9QAF4 648 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Tpd52l1O54818 204 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Wnt7aP24383 349 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Nucb2P81117 420 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Arhgef16Q3U5C8 713 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Mdh1bQ5F204 500 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Myo19Q5SV80 963 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Prpf4bQ61136 1007 aaKnown RBP18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Q8BZJ8 459 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Cnpy2Q9QXT0 182 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Pdia4P08003 638 aaKnown RBP18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Pdzph1Q8BGR1 1238 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 SpidrQ8BGX7 933 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ehd2Q8BH64 543 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Akap8Q9DBR0 687 aaKnown RBP18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 GdaQ9R111 454 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 NcapgE9PWG6 1004 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Tpm3P21107 285 aaKnown RBP18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Gse1Q3U3C9 1213 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ezh2Q61188 746 aaKnown RBP18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 AllcQ9JHX6 414 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 Large1Q9Z1M7 756 aa18.19■□□□□ 0.5
Trim39-203ENSMUST00000113706 CrkQ64010 304 aa18.18■□□□□ 0.5
Trim39-203ENSMUST00000113706 GnptabQ69ZN6 1235 aa18.18■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ano10Q8BH79 659 aa18.18■□□□□ 0.5
Trim39-203ENSMUST00000113706 1700003F12RikA2AKE5 210 aa18.18■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ptgs1P22437 602 aa18.18■□□□□ 0.5
Trim39-203ENSMUST00000113706 Zswim8Q3UHH1 1832 aaKnown RBP18.18■□□□□ 0.5
Trim39-203ENSMUST00000113706 Zscan29E9Q5B4 869 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Dapk3O54784 448 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Armc2Q3URY6 854 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Hip1rQ9JKY5 1068 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Plxnb2B2RXS4 1842 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 A430078G23RikE9Q7Y4 484 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Vcam1P29533 739 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Gjb4Q02738 266 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ddx31Q6NZQ2 687 aaKnown RBP18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Cavin1O54724 392 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Trmt112Q9DCG9 125 aa18.17■□□□□ 0.5
Trim39-203ENSMUST00000113706 Large2Q5XPT3 690 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Luzp1Q8R4U7 1068 aaKnown RBP18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Apobec3Q99J72 440 aaKnown RBP18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Bin1O08539 588 aaKnown RBP18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Nfil3O08750 462 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Epb41l2O70318 988 aaKnown RBP18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 GnaqP21279 359 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 PparaP23204 468 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Gas2l3Q3UWW6 683 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ccdc150Q8CDI7 1110 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Smc2Q8CG48 1191 aaKnown RBP18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Ciapin1Q8WTY4 309 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Sept14Q9DA97 430 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Kcnh3Q9WVJ0 1095 aa18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 VirmaA2AIV2 1811 aaKnown RBP18.16■□□□□ 0.5
Trim39-203ENSMUST00000113706 Gm43738A0A0G2JEA5 862 aa18.15■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms