RNA–Protein interactions for RNA: ENSMUST00000099937.4

Ccdc58-201, Transcript of Coiled-coil domain-containing protein 58, mousemouse

TSL 3 BASIC

Gene Ccdc58, Length 747 nt, Biotype protein coding, Subcellular localisation Axon, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58-201ENSMUST00000099937 Atp9bP98195 1146 aa16.4■□□□□ 0.22
Ccdc58-201ENSMUST00000099937 Crhr2Q60748 411 aa16.4■□□□□ 0.22
Ccdc58-201ENSMUST00000099937 Erc2Q6PH08 957 aa16.4■□□□□ 0.22
Ccdc58-201ENSMUST00000099937 Fbxo28Q8BIG4 368 aa16.4■□□□□ 0.22
Ccdc58-201ENSMUST00000099937 Ttc8Q8VD72 515 aa16.4■□□□□ 0.22
Ccdc58-201ENSMUST00000099937 Mettl16Q9CQG2 553 aaKnown RBP16.4■□□□□ 0.22
Ccdc58-201ENSMUST00000099937 Rnf19bA2A7Q9 732 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Pnmal2G3X9N3 661 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Nck2O55033 380 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Usp53P15975 1069 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Gja8P28236 440 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Mybl2P48972 704 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Ercc3P49135 783 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Ptpn18Q61152 453 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Sp4Q62445 782 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Prune1Q8BIW1 454 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Adgra1Q8C4G9 578 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Eaf2Q91ZD6 262 aa16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Usp14Q9JMA1 493 aaKnown RBP16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Tcof1O08784 1320 aaKnown RBP16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 SktA2AQ25 1946 aaKnown RBP16.39■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Magea4F2Z493 315 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Abl1P00520 1123 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Wwc1Q5SXA9 1104 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 BcrQ6PAJ1 1270 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Olfr118Q7TRJ6 321 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Siglec10Q80ZE3 688 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 E4f1Q8CCE9 783 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Rhot2Q8JZN7 620 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Styxl1Q9DAR2 321 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Dclk1Q9JLM8 756 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 FAM186AQ9D9R9 1790 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Zmym2Q9CU65 1376 aa16.38■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 A430078G23RikE9Q7Y4 484 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Nploc4P60670 608 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Eya3P97480 510 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Pgrmc2Q80UU9 217 aaKnown RBP16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 U2af1l4Q8BGJ9 220 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Alx1Q8C8B0 326 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Zbtb9Q8CDC7 459 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Dppa3Q8QZY3 150 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Tdrd3Q91W18 743 aaKnown RBP16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Dock5B2RY04 1868 aa16.37■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 A0A1W2P6Q8 802 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Gm9048A0A1W2P7H4 802 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 A0A1W2P7Z8 802 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Gm9046A0A1W2P855 802 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Slc6a20bO88575 635 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Atp11aP98197 1187 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 GabpaQ00422 454 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Tex2Q6ZPJ0 1128 aaKnown RBP16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Usp17leQ7M764 540 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Champ1Q8K327 802 aaKnown RBP16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Eid1Q9DCR4 169 aa16.36■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Celf5D3Z4T1 395 aaKnown RBP16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Ftl1P29391 183 aa16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Gnat2P50149 354 aa16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Cyp2c39P56656 490 aa16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Col19a1Q0VF58 1136 aa16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Zfp90Q61967 636 aa16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Mtmr4Q91XS1 1190 aa16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Atp8b3Q6UQ17 1335 aa16.35■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Ythdc1E9Q5K9 736 aaKnown RBP16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Nmt2O70311 529 aa16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Pde11aP0C1Q2 933 aa16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Tff2Q03404 129 aa16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Cfap52Q5F201 620 aa16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 SkilQ60665 675 aa16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 WaplQ65Z40 1200 aaKnown RBP16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Ttc12Q8BW49 704 aa16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Capn10Q9ESK3 666 aa16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Pdcd6ipQ9WU78 869 aaKnown RBP16.34■□□□□ 0.21
Ccdc58-201ENSMUST00000099937 Dennd3A2RT67 1274 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Hoxc6P10629 235 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Q3TYL0 343 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Glra4Q61603 456 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Entpd3Q8BFW6 529 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Ift74Q8BKE9 600 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Scfd1Q8BRF7 639 aaKnown RBP16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 RestQ8VIG1 1082 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Xrn2Q9DBR1 951 aaKnown RBP16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 SerhlQ9EPB5 311 aa16.33■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Brd1E9PZ26 1189 aaKnown RBP16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Ppp1r9aH3BJD6 1292 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 AoahO35298 574 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Btg4O70552 250 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Parp2O88554 559 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Hoxc10P31257 342 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Hspd1P63038 573 aaKnown RBP16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Il6stQ00560 917 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Ehmt1Q5DW34 1296 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Spata7Q80VP2 582 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Wbp1lQ8BGW2 348 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Gcc1Q9D4H2 778 aa16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Akap8Q9DBR0 687 aaKnown RBP16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Tfip11Q9ERA6 838 aaKnown RBP16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 SmapQ9R0P4 181 aaKnown RBP16.32■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Rad50P70388 1312 aa16.31■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Flot1O08917 428 aa16.31■□□□□ 0.2
Ccdc58-201ENSMUST00000099937 Sfi1Q3UZY0 1216 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms