RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Lce1gQ9D195 139 aa4.56□□□□□ -1.68
Tpm1-209ENSMUST00000113690 Sprr2iO70560 76 aa4.53□□□□□ -1.68
Tpm1-209ENSMUST00000113690 Krtap4-1Q3UUY3 169 aa4.52□□□□□ -1.69
Tpm1-209ENSMUST00000113690 A0A1Y7VLE6 161 aa4.48□□□□□ -1.69
Tpm1-209ENSMUST00000113690 Sprr2hO70559 108 aa4.48□□□□□ -1.69
Tpm1-209ENSMUST00000113690 Gm11596B1AQB0 205 aa4.47□□□□□ -1.69
Tpm1-209ENSMUST00000113690 Lce3eF8VQJ0 98 aa4.45□□□□□ -1.7
Tpm1-209ENSMUST00000113690 Lce3fQ6PAI4 98 aa4.45□□□□□ -1.7
Tpm1-209ENSMUST00000113690 Gm11555B1AQ89 175 aa4.43□□□□□ -1.7
Tpm1-209ENSMUST00000113690 ObscnA2AAJ9 8891 aaKnown RBP4.41□□□□□ -1.7
Tpm1-209ENSMUST00000113690 Krtap28-13A0A087WQP5 138 aa4.41□□□□□ -1.7
Tpm1-209ENSMUST00000113690 Lce3aQ497I5 98 aa4.39□□□□□ -1.71
Tpm1-209ENSMUST00000113690 Gm11564A2A4L9 201 aa4.37□□□□□ -1.71
Tpm1-209ENSMUST00000113690 Gm11563B1AQ90 168 aa4.37□□□□□ -1.71
Tpm1-209ENSMUST00000113690 Gm11595B1AQA7 289 aa4.37□□□□□ -1.71
Tpm1-209ENSMUST00000113690 Krtap4-8B1AQA8 209 aa4.37□□□□□ -1.71
Tpm1-209ENSMUST00000113690 Mt4P47945 62 aa4.35□□□□□ -1.71
Tpm1-209ENSMUST00000113690 Sprr2eO70556 76 aa4.34□□□□□ -1.71
Tpm1-209ENSMUST00000113690 2300003K06RikA2A4M0 262 aa4.32□□□□□ -1.72
Tpm1-209ENSMUST00000113690 Sprr2fO70557 76 aa4.31□□□□□ -1.72
Tpm1-209ENSMUST00000113690 A030005L19RikA0A1Y7VIU2 113 aa4.31□□□□□ -1.72
Tpm1-209ENSMUST00000113690 Gm38119A0A0A6YX29 146 aa4.3□□□□□ -1.72
Tpm1-209ENSMUST00000113690 Krtap4-9B1AQA9 244 aa4.3□□□□□ -1.72
Tpm1-209ENSMUST00000113690 Krtap4-16Q91W93 202 aa4.28□□□□□ -1.72
Tpm1-209ENSMUST00000113690 Krtap31-2Q8CAY5 177 aa4.28□□□□□ -1.72
Tpm1-209ENSMUST00000113690 A030005K14RikA0A1Y7VNY1 122 aa4.24□□□□□ -1.73
Tpm1-209ENSMUST00000113690 Krtap4-13Q9D7P3 165 aa4.19□□□□□ -1.74
Tpm1-209ENSMUST00000113690 Sprr2kO70562 68 aa4.18□□□□□ -1.74
Tpm1-209ENSMUST00000113690 Gm7544A0A1Y7VJ58 118 aa4.14□□□□□ -1.75
Tpm1-209ENSMUST00000113690 Muc16A0A140LJ72 8478 aa4.12□□□□□ -1.75
Tpm1-209ENSMUST00000113690 Lce1bQ9D149 137 aa4.06□□□□□ -1.76
Tpm1-209ENSMUST00000113690 Lce1lQ9D1G7 135 aa4.05□□□□□ -1.76
Tpm1-209ENSMUST00000113690 Mt1P02802 61 aaKnown RBP4.02□□□□□ -1.77
Tpm1-209ENSMUST00000113690 Lce1kJ3QP15 125 aa4.01□□□□□ -1.77
Tpm1-209ENSMUST00000113690 Krtap4-7Q9D732 168 aa4.01□□□□□ -1.77
Tpm1-209ENSMUST00000113690 Eppk1Q8R0W0 6548 aa3.94□□□□□ -1.78
Tpm1-209ENSMUST00000113690 Macf1Q9QXZ0 7354 aaKnown RBP3.9□□□□□ -1.79
Tpm1-209ENSMUST00000113690 A0A1Y7VJ07 166 aa3.83□□□□□ -1.8
Tpm1-209ENSMUST00000113690 Gm10024A0A0A0MQA4 119 aa3.8□□□□□ -1.8
Tpm1-209ENSMUST00000113690 Gm11568A2A4M2 211 aa3.77□□□□□ -1.81
Tpm1-209ENSMUST00000113690 Krtap9-1Q64526 186 aa3.77□□□□□ -1.81
Tpm1-209ENSMUST00000113690 Krtap20-2E9Q0A8 60 aa3.73□□□□□ -1.81
Tpm1-209ENSMUST00000113690 Krtap6-3A0A087WQL6 57 aa3.71□□□□□ -1.82
Tpm1-209ENSMUST00000113690 Gpr98Q8VHN7 6298 aaKnown RBP3.71□□□□□ -1.82
Tpm1-209ENSMUST00000113690 A030003K21RikA0A1Y7VIM3 128 aa3.66□□□□□ -1.82
Tpm1-209ENSMUST00000113690 A030014E15RikA0A1Y7VJV2 120 aa3.65□□□□□ -1.82
Tpm1-209ENSMUST00000113690 Gm11639A0A1D5RLM8 5808 aa3.57□□□□□ -1.84
Tpm1-209ENSMUST00000113690 Kmt2dQ6PDK2 5588 aa3.53□□□□□ -1.84
Tpm1-209ENSMUST00000113690 Gm6217A0A1Y7VJK9 128 aa3.48□□□□□ -1.85
Tpm1-209ENSMUST00000113690 Mt3P28184 68 aa3.47□□□□□ -1.85
Tpm1-209ENSMUST00000113690 Gm11554B1AQB2 190 aa3.46□□□□□ -1.85
Tpm1-209ENSMUST00000113690 Krtap5-2Q9D5Z7 189 aa3.45□□□□□ -1.86
Tpm1-209ENSMUST00000113690 Gm10153A0A1B0GRL1 320 aa3.45□□□□□ -1.86
Tpm1-209ENSMUST00000113690 A0A286YCP9 139 aa3.45□□□□□ -1.86
Tpm1-209ENSMUST00000113690 Hmcn1D3YXG0 5634 aa3.41□□□□□ -1.86
Tpm1-209ENSMUST00000113690 Muc19Q6PZE0 7524 aa3.32□□□□□ -1.88
Tpm1-209ENSMUST00000113690 Gm11559Q9D3H7 191 aa3.29□□□□□ -1.88
Tpm1-209ENSMUST00000113690 DstQ91ZU6 7393 aaKnown RBP3.23□□□□□ -1.89
Tpm1-209ENSMUST00000113690 Gm2431E9Q8S1 172 aa3.17□□□□□ -1.9
Tpm1-209ENSMUST00000113690 Gm4553A0A1B0GSA9 284 aa3.16□□□□□ -1.9
Tpm1-209ENSMUST00000113690 NebE9Q1W3 7152 aa3.14□□□□□ -1.91
Tpm1-209ENSMUST00000113690 Gm45337A0A1B0GS71 263 aa3.13□□□□□ -1.91
Tpm1-209ENSMUST00000113690 1110025L11RikO09048 78 aa3.11□□□□□ -1.91
Tpm1-209ENSMUST00000113690 Krtap6-5Q925H3 78 aa3.11□□□□□ -1.91
Tpm1-209ENSMUST00000113690 Gm40460A0A1B0GR10 244 aa3.04□□□□□ -1.92
Tpm1-209ENSMUST00000113690 Gm7579A0A1B0GRJ4 243 aa3.04□□□□□ -1.92
Tpm1-209ENSMUST00000113690 Krtap5-5Q2TA51 241 aa3.04□□□□□ -1.92
Tpm1-209ENSMUST00000113690 Krtap5-4Q62220 223 aa3.04□□□□□ -1.92
Tpm1-209ENSMUST00000113690 Sprr2bO70554 98 aa2.86□□□□□ -1.95
Tpm1-209ENSMUST00000113690 Gm39115A0A1B0GSH7 232 aa2.78□□□□□ -1.97
Tpm1-209ENSMUST00000113690 Gm10229O08631 77 aa2.75□□□□□ -1.97
Tpm1-209ENSMUST00000113690 AhnakE9Q616 5656 aaKnown RBP2.75□□□□□ -1.97
Tpm1-209ENSMUST00000113690 Gm45618A0A1B0GSA0 219 aa2.66□□□□□ -1.98
Tpm1-209ENSMUST00000113690 Phgr1Q8K0G7 91 aa2.66□□□□□ -1.98
Tpm1-209ENSMUST00000113690 Gm11567Q9D141 195 aa2.59□□□□□ -2
Tpm1-209ENSMUST00000113690 Krtap21-1Q925H4 128 aa2.57□□□□□ -2
Tpm1-209ENSMUST00000113690 Gm29735A0A1B0GT06 219 aa2.33□□□□□ -2.04
Tpm1-209ENSMUST00000113690 Krtap6-2O08884 159 aa2.28□□□□□ -2.04
Tpm1-209ENSMUST00000113690 Krtap5-1Q64507 230 aa1.8□□□□□ -2.12
Tpm1-209ENSMUST00000113690 Gm4559A4IF42 199 aa1.76□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 109.1 ms