RNA–Protein interactions for RNA: ENSMUST00000107217.5

Sema6c-203, Transcript of Semaphorin-6C, mousemouse

TSL 1 (best) BASIC

Gene Sema6c, Length 3,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6c-203ENSMUST00000107217 Gm38119A0A0A6YX29 146 aa4.7□□□□□ -1.66
Sema6c-203ENSMUST00000107217 Sprr2kO70562 68 aa4.67□□□□□ -1.66
Sema6c-203ENSMUST00000107217 Krtap4-13Q9D7P3 165 aa4.62□□□□□ -1.67
Sema6c-203ENSMUST00000107217 Gm10100J3QK64 120 aa4.59□□□□□ -1.67
Sema6c-203ENSMUST00000107217 Sprr2dO70555 85 aa4.53□□□□□ -1.68
Sema6c-203ENSMUST00000107217 2300003K06RikA2A4M0 262 aa4.52□□□□□ -1.69
Sema6c-203ENSMUST00000107217 Lce1bQ9D149 137 aa4.52□□□□□ -1.69
Sema6c-203ENSMUST00000107217 Lce1cQ9D1C5 147 aa4.51□□□□□ -1.69
Sema6c-203ENSMUST00000107217 Sprr2iO70560 76 aa4.49□□□□□ -1.69
Sema6c-203ENSMUST00000107217 Gm10142J3KMP7 120 aa4.49□□□□□ -1.69
Sema6c-203ENSMUST00000107217 Krtap4-7Q9D732 168 aa4.42□□□□□ -1.7
Sema6c-203ENSMUST00000107217 Lce1lQ9D1G7 135 aa4.41□□□□□ -1.7
Sema6c-203ENSMUST00000107217 Lce3bQ9CQM7 98 aa4.41□□□□□ -1.7
Sema6c-203ENSMUST00000107217 Lce1fB9EJP6 147 aa4.37□□□□□ -1.71
Sema6c-203ENSMUST00000107217 Lce1a1Q9CQH5 143 aa4.37□□□□□ -1.71
Sema6c-203ENSMUST00000107217 Lce3cQ91V05 98 aa4.35□□□□□ -1.71
Sema6c-203ENSMUST00000107217 Lce3dE9Q8V1 98 aa4.33□□□□□ -1.72
Sema6c-203ENSMUST00000107217 Krtap6-3A0A087WQL6 57 aa4.32□□□□□ -1.72
Sema6c-203ENSMUST00000107217 Sprr2fO70557 76 aa4.3□□□□□ -1.72
Sema6c-203ENSMUST00000107217 Krtap4-16Q91W93 202 aa4.28□□□□□ -1.72
Sema6c-203ENSMUST00000107217 ObscnA2AAJ9 8891 aaKnown RBP4.26□□□□□ -1.73
Sema6c-203ENSMUST00000107217 Macf1Q9QXZ0 7354 aaKnown RBP4.25□□□□□ -1.73
Sema6c-203ENSMUST00000107217 Lce3eF8VQJ0 98 aa4.22□□□□□ -1.73
Sema6c-203ENSMUST00000107217 Lce3fQ6PAI4 98 aa4.22□□□□□ -1.73
Sema6c-203ENSMUST00000107217 Lce3aQ497I5 98 aa4.18□□□□□ -1.74
Sema6c-203ENSMUST00000107217 Lce1kJ3QP15 125 aa4.17□□□□□ -1.74
Sema6c-203ENSMUST00000107217 Krtap19-4Q925H7 84 aa4.15□□□□□ -1.75
Sema6c-203ENSMUST00000107217 Krtap20-2E9Q0A8 60 aa4.12□□□□□ -1.75
Sema6c-203ENSMUST00000107217 Sprr2hO70559 108 aa4.1□□□□□ -1.75
Sema6c-203ENSMUST00000107217 Sprr2eO70556 76 aa4.1□□□□□ -1.75
Sema6c-203ENSMUST00000107217 A0A1Y7VJH8 109 aa3.96□□□□□ -1.78
Sema6c-203ENSMUST00000107217 Gm11568A2A4M2 211 aa3.91□□□□□ -1.78
Sema6c-203ENSMUST00000107217 Krtap9-1Q64526 186 aa3.91□□□□□ -1.78
Sema6c-203ENSMUST00000107217 Krtap5-2Q9D5Z7 189 aa3.88□□□□□ -1.79
Sema6c-203ENSMUST00000107217 Gm10024A0A0A0MQA4 119 aa3.88□□□□□ -1.79
Sema6c-203ENSMUST00000107217 Mt1P02802 61 aaKnown RBP3.87□□□□□ -1.79
Sema6c-203ENSMUST00000107217 Gm11554B1AQB2 190 aa3.82□□□□□ -1.8
Sema6c-203ENSMUST00000107217 Gm11559Q9D3H7 191 aa3.75□□□□□ -1.81
Sema6c-203ENSMUST00000107217 Muc19Q6PZE0 7524 aa3.73□□□□□ -1.81
Sema6c-203ENSMUST00000107217 Kmt2dQ6PDK2 5588 aa3.73□□□□□ -1.81
Sema6c-203ENSMUST00000107217 Gm4553A0A1B0GSA9 284 aa3.64□□□□□ -1.83
Sema6c-203ENSMUST00000107217 Hmcn1D3YXG0 5634 aa3.62□□□□□ -1.83
Sema6c-203ENSMUST00000107217 Gm10153A0A1B0GRL1 320 aa3.58□□□□□ -1.84
Sema6c-203ENSMUST00000107217 DstQ91ZU6 7393 aaKnown RBP3.55□□□□□ -1.84
Sema6c-203ENSMUST00000107217 Gm2431E9Q8S1 172 aa3.55□□□□□ -1.84
Sema6c-203ENSMUST00000107217 Mt3P28184 68 aa3.55□□□□□ -1.84
Sema6c-203ENSMUST00000107217 Gm45337A0A1B0GS71 263 aa3.51□□□□□ -1.85
Sema6c-203ENSMUST00000107217 Eppk1Q8R0W0 6548 aa3.5□□□□□ -1.85
Sema6c-203ENSMUST00000107217 A030005L19RikA0A1Y7VIU2 113 aa3.44□□□□□ -1.86
Sema6c-203ENSMUST00000107217 NebE9Q1W3 7152 aa3.43□□□□□ -1.86
Sema6c-203ENSMUST00000107217 Gm40460A0A1B0GR10 244 aa3.39□□□□□ -1.87
Sema6c-203ENSMUST00000107217 Gm7579A0A1B0GRJ4 243 aa3.39□□□□□ -1.87
Sema6c-203ENSMUST00000107217 Krtap5-5Q2TA51 241 aa3.39□□□□□ -1.87
Sema6c-203ENSMUST00000107217 Krtap5-4Q62220 223 aa3.39□□□□□ -1.87
Sema6c-203ENSMUST00000107217 Gm11639A0A1D5RLM8 5808 aa3.38□□□□□ -1.87
Sema6c-203ENSMUST00000107217 A0A1Y7VLE6 161 aa3.26□□□□□ -1.89
Sema6c-203ENSMUST00000107217 Gm39115A0A1B0GSH7 232 aa3.23□□□□□ -1.89
Sema6c-203ENSMUST00000107217 Gpr98Q8VHN7 6298 aaKnown RBP3.14□□□□□ -1.91
Sema6c-203ENSMUST00000107217 AhnakE9Q616 5656 aaKnown RBP3.04□□□□□ -1.92
Sema6c-203ENSMUST00000107217 Gm45618A0A1B0GSA0 219 aa2.89□□□□□ -1.95
Sema6c-203ENSMUST00000107217 1110025L11RikO09048 78 aa2.87□□□□□ -1.95
Sema6c-203ENSMUST00000107217 Krtap6-5Q925H3 78 aa2.87□□□□□ -1.95
Sema6c-203ENSMUST00000107217 Sprr2bO70554 98 aa2.65□□□□□ -1.99
Sema6c-203ENSMUST00000107217 A0A1Y7VJ07 166 aa2.62□□□□□ -1.99
Sema6c-203ENSMUST00000107217 Gm10229O08631 77 aa2.58□□□□□ -2
Sema6c-203ENSMUST00000107217 Phgr1Q8K0G7 91 aa2.56□□□□□ -2
Sema6c-203ENSMUST00000107217 Gm11567Q9D141 195 aa2.56□□□□□ -2
Sema6c-203ENSMUST00000107217 Gm29735A0A1B0GT06 219 aa2.51□□□□□ -2.01
Sema6c-203ENSMUST00000107217 Krtap21-1Q925H4 128 aa2.31□□□□□ -2.04
Sema6c-203ENSMUST00000107217 Krtap6-2O08884 159 aa2.23□□□□□ -2.05
Sema6c-203ENSMUST00000107217 A0A286YCP9 139 aa2.09□□□□□ -2.07
Sema6c-203ENSMUST00000107217 A030003K21RikA0A1Y7VIM3 128 aa1.85□□□□□ -2.11
Sema6c-203ENSMUST00000107217 Krtap5-1Q64507 230 aa1.8□□□□□ -2.12
Sema6c-203ENSMUST00000107217 Gm4559A4IF42 199 aa1.46□□□□□ -2.18
Sema6c-203ENSMUST00000107217 Gm6217A0A1Y7VJK9 128 aa1.35□□□□□ -2.19
Sema6c-203ENSMUST00000107217 Krtap28-13A0A087WQP5 138 aa1.24□□□□□ -2.21
Sema6c-203ENSMUST00000107217 Krtap28-10A0A1Y7VP58 119 aa1.24□□□□□ -2.21
Sema6c-203ENSMUST00000107217 A030005K14RikA0A1Y7VNY1 122 aa0.77□□□□□ -2.29
Sema6c-203ENSMUST00000107217 A030014E15RikA0A1Y7VJV2 120 aa0.75□□□□□ -2.29
Sema6c-203ENSMUST00000107217 Gm7544A0A1Y7VJ58 118 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 56.1 ms