RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 Krtap4-6Q3V4B7 195 aa4.1□□□□□ -1.75
Casc4-202ENSMUST00000089912 Lce1gQ9D195 139 aa4.09□□□□□ -1.76
Casc4-202ENSMUST00000089912 ObscnA2AAJ9 8891 aaKnown RBP4.07□□□□□ -1.76
Casc4-202ENSMUST00000089912 Lce3aQ497I5 98 aa4.07□□□□□ -1.76
Casc4-202ENSMUST00000089912 Krtap19-4Q925H7 84 aa4.06□□□□□ -1.76
Casc4-202ENSMUST00000089912 Krtap4-16Q91W93 202 aa4.03□□□□□ -1.76
Casc4-202ENSMUST00000089912 Krtap28-10A0A1Y7VP58 119 aa4.02□□□□□ -1.77
Casc4-202ENSMUST00000089912 Krtap31-1Q9D644 177 aa3.99□□□□□ -1.77
Casc4-202ENSMUST00000089912 Mt4P47945 62 aa3.99□□□□□ -1.77
Casc4-202ENSMUST00000089912 Sprr2iO70560 76 aa3.97□□□□□ -1.77
Casc4-202ENSMUST00000089912 Sprr2kO70562 68 aa3.94□□□□□ -1.78
Casc4-202ENSMUST00000089912 Krtap4-1Q3UUY3 169 aa3.93□□□□□ -1.78
Casc4-202ENSMUST00000089912 Gm11596B1AQB0 205 aa3.92□□□□□ -1.78
Casc4-202ENSMUST00000089912 Sprr2hO70559 108 aa3.92□□□□□ -1.78
Casc4-202ENSMUST00000089912 Lce1bQ9D149 137 aa3.88□□□□□ -1.79
Casc4-202ENSMUST00000089912 Macf1Q9QXZ0 7354 aaKnown RBP3.87□□□□□ -1.79
Casc4-202ENSMUST00000089912 A0A1Y7VLE6 161 aa3.85□□□□□ -1.79
Casc4-202ENSMUST00000089912 Lce1lQ9D1G7 135 aa3.85□□□□□ -1.79
Casc4-202ENSMUST00000089912 Sprr2fO70557 76 aa3.84□□□□□ -1.79
Casc4-202ENSMUST00000089912 Krtap28-13A0A087WQP5 138 aa3.81□□□□□ -1.8
Casc4-202ENSMUST00000089912 A030005L19RikA0A1Y7VIU2 113 aa3.8□□□□□ -1.8
Casc4-202ENSMUST00000089912 Krtap4-9B1AQA9 244 aa3.78□□□□□ -1.8
Casc4-202ENSMUST00000089912 Sprr2eO70556 76 aa3.76□□□□□ -1.81
Casc4-202ENSMUST00000089912 Gm11564A2A4L9 201 aa3.75□□□□□ -1.81
Casc4-202ENSMUST00000089912 Gm11563B1AQ90 168 aa3.75□□□□□ -1.81
Casc4-202ENSMUST00000089912 Gm11595B1AQA7 289 aa3.75□□□□□ -1.81
Casc4-202ENSMUST00000089912 Krtap4-8B1AQA8 209 aa3.75□□□□□ -1.81
Casc4-202ENSMUST00000089912 Gm11555B1AQ89 175 aa3.74□□□□□ -1.81
Casc4-202ENSMUST00000089912 Lce1kJ3QP15 125 aa3.72□□□□□ -1.81
Casc4-202ENSMUST00000089912 Krtap4-13Q9D7P3 165 aa3.72□□□□□ -1.81
Casc4-202ENSMUST00000089912 2300003K06RikA2A4M0 262 aa3.72□□□□□ -1.81
Casc4-202ENSMUST00000089912 A030005K14RikA0A1Y7VNY1 122 aa3.68□□□□□ -1.82
Casc4-202ENSMUST00000089912 Muc19Q6PZE0 7524 aa3.66□□□□□ -1.82
Casc4-202ENSMUST00000089912 Gm7544A0A1Y7VJ58 118 aa3.64□□□□□ -1.83
Casc4-202ENSMUST00000089912 Gm10024A0A0A0MQA4 119 aa3.61□□□□□ -1.83
Casc4-202ENSMUST00000089912 Krtap4-7Q9D732 168 aa3.56□□□□□ -1.84
Casc4-202ENSMUST00000089912 Krtap31-2Q8CAY5 177 aa3.52□□□□□ -1.85
Casc4-202ENSMUST00000089912 Mt1P02802 61 aaKnown RBP3.5□□□□□ -1.85
Casc4-202ENSMUST00000089912 Krtap6-3A0A087WQL6 57 aa3.43□□□□□ -1.86
Casc4-202ENSMUST00000089912 Krtap20-2E9Q0A8 60 aa3.39□□□□□ -1.87
Casc4-202ENSMUST00000089912 Kmt2dQ6PDK2 5588 aa3.34□□□□□ -1.87
Casc4-202ENSMUST00000089912 DstQ91ZU6 7393 aaKnown RBP3.31□□□□□ -1.88
Casc4-202ENSMUST00000089912 A0A1Y7VJ07 166 aa3.29□□□□□ -1.88
Casc4-202ENSMUST00000089912 Gm11568A2A4M2 211 aa3.24□□□□□ -1.89
Casc4-202ENSMUST00000089912 Krtap9-1Q64526 186 aa3.24□□□□□ -1.89
Casc4-202ENSMUST00000089912 A030003K21RikA0A1Y7VIM3 128 aa3.21□□□□□ -1.9
Casc4-202ENSMUST00000089912 Gm6217A0A1Y7VJK9 128 aa3.21□□□□□ -1.9
Casc4-202ENSMUST00000089912 Hmcn1D3YXG0 5634 aa3.15□□□□□ -1.9
Casc4-202ENSMUST00000089912 A030014E15RikA0A1Y7VJV2 120 aa3.15□□□□□ -1.91
Casc4-202ENSMUST00000089912 Gm11554B1AQB2 190 aa3.14□□□□□ -1.91
Casc4-202ENSMUST00000089912 Mt3P28184 68 aa3.13□□□□□ -1.91
Casc4-202ENSMUST00000089912 Eppk1Q8R0W0 6548 aa3□□□□□ -1.93
Casc4-202ENSMUST00000089912 NebE9Q1W3 7152 aa3□□□□□ -1.93
Casc4-202ENSMUST00000089912 A0A286YCP9 139 aa2.86□□□□□ -1.95
Casc4-202ENSMUST00000089912 Gm11639A0A1D5RLM8 5808 aa2.84□□□□□ -1.95
Casc4-202ENSMUST00000089912 Gm11559Q9D3H7 191 aa2.82□□□□□ -1.96
Casc4-202ENSMUST00000089912 Gpr98Q8VHN7 6298 aaKnown RBP2.81□□□□□ -1.96
Casc4-202ENSMUST00000089912 Krtap5-2Q9D5Z7 189 aa2.8□□□□□ -1.96
Casc4-202ENSMUST00000089912 Gm10153A0A1B0GRL1 320 aa2.78□□□□□ -1.97
Casc4-202ENSMUST00000089912 1110025L11RikO09048 78 aa2.74□□□□□ -1.97
Casc4-202ENSMUST00000089912 Krtap6-5Q925H3 78 aa2.74□□□□□ -1.97
Casc4-202ENSMUST00000089912 Gm4553A0A1B0GSA9 284 aa2.64□□□□□ -1.99
Casc4-202ENSMUST00000089912 Gm2431E9Q8S1 172 aa2.56□□□□□ -2
Casc4-202ENSMUST00000089912 Gm45337A0A1B0GS71 263 aa2.47□□□□□ -2.01
Casc4-202ENSMUST00000089912 Phgr1Q8K0G7 91 aa2.47□□□□□ -2.01
Casc4-202ENSMUST00000089912 Sprr2bO70554 98 aa2.46□□□□□ -2.02
Casc4-202ENSMUST00000089912 Gm10229O08631 77 aa2.46□□□□□ -2.02
Casc4-202ENSMUST00000089912 AhnakE9Q616 5656 aaKnown RBP2.41□□□□□ -2.02
Casc4-202ENSMUST00000089912 Gm40460A0A1B0GR10 244 aa2.38□□□□□ -2.03
Casc4-202ENSMUST00000089912 Gm7579A0A1B0GRJ4 243 aa2.38□□□□□ -2.03
Casc4-202ENSMUST00000089912 Krtap5-5Q2TA51 241 aa2.38□□□□□ -2.03
Casc4-202ENSMUST00000089912 Krtap5-4Q62220 223 aa2.38□□□□□ -2.03
Casc4-202ENSMUST00000089912 Gm39115A0A1B0GSH7 232 aa2.34□□□□□ -2.04
Casc4-202ENSMUST00000089912 Gm11567Q9D141 195 aa2.23□□□□□ -2.05
Casc4-202ENSMUST00000089912 Krtap21-1Q925H4 128 aa2.2□□□□□ -2.06
Casc4-202ENSMUST00000089912 Gm45618A0A1B0GSA0 219 aa2.17□□□□□ -2.06
Casc4-202ENSMUST00000089912 Krtap6-2O08884 159 aa2.04□□□□□ -2.08
Casc4-202ENSMUST00000089912 Gm29735A0A1B0GT06 219 aa1.87□□□□□ -2.11
Casc4-202ENSMUST00000089912 Krtap5-1Q64507 230 aa1.49□□□□□ -2.17
Casc4-202ENSMUST00000089912 Gm4559A4IF42 199 aa1.41□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 326.5 ms