RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Lce3bQ9CQM7 98 aa5.4□□□□□ -1.54
Sec61a1-201ENSMUST00000032168 Lce1fB9EJP6 147 aa5.37□□□□□ -1.55
Sec61a1-201ENSMUST00000032168 Lce1a1Q9CQH5 143 aa5.37□□□□□ -1.55
Sec61a1-201ENSMUST00000032168 Lce1bQ9D149 137 aa5.3□□□□□ -1.56
Sec61a1-201ENSMUST00000032168 Gm10100J3QK64 120 aa5.29□□□□□ -1.56
Sec61a1-201ENSMUST00000032168 Krtap4-13Q9D7P3 165 aa5.28□□□□□ -1.56
Sec61a1-201ENSMUST00000032168 Krtap19-4Q925H7 84 aa5.28□□□□□ -1.56
Sec61a1-201ENSMUST00000032168 2300003K06RikA2A4M0 262 aa5.23□□□□□ -1.57
Sec61a1-201ENSMUST00000032168 Lce3cQ91V05 98 aa5.17□□□□□ -1.58
Sec61a1-201ENSMUST00000032168 Sprr2kO70562 68 aa5.16□□□□□ -1.58
Sec61a1-201ENSMUST00000032168 Gm10142J3KMP7 120 aa5.14□□□□□ -1.59
Sec61a1-201ENSMUST00000032168 Lce3eF8VQJ0 98 aa5.12□□□□□ -1.59
Sec61a1-201ENSMUST00000032168 Lce3fQ6PAI4 98 aa5.12□□□□□ -1.59
Sec61a1-201ENSMUST00000032168 ObscnA2AAJ9 8891 aaKnown RBP5.11□□□□□ -1.59
Sec61a1-201ENSMUST00000032168 Lce1kJ3QP15 125 aa5.05□□□□□ -1.6
Sec61a1-201ENSMUST00000032168 Krtap4-7Q9D732 168 aa5.05□□□□□ -1.6
Sec61a1-201ENSMUST00000032168 Lce3dE9Q8V1 98 aa5.02□□□□□ -1.61
Sec61a1-201ENSMUST00000032168 Lce1lQ9D1G7 135 aa4.97□□□□□ -1.61
Sec61a1-201ENSMUST00000032168 Sprr2iO70560 76 aa4.94□□□□□ -1.62
Sec61a1-201ENSMUST00000032168 Sprr2hO70559 108 aa4.93□□□□□ -1.62
Sec61a1-201ENSMUST00000032168 Mt1P02802 61 aaKnown RBP4.9□□□□□ -1.63
Sec61a1-201ENSMUST00000032168 Lce3aQ497I5 98 aa4.89□□□□□ -1.63
Sec61a1-201ENSMUST00000032168 Macf1Q9QXZ0 7354 aaKnown RBP4.86□□□□□ -1.63
Sec61a1-201ENSMUST00000032168 Krtap20-2E9Q0A8 60 aa4.83□□□□□ -1.64
Sec61a1-201ENSMUST00000032168 Gm11568A2A4M2 211 aa4.81□□□□□ -1.64
Sec61a1-201ENSMUST00000032168 Krtap9-1Q64526 186 aa4.81□□□□□ -1.64
Sec61a1-201ENSMUST00000032168 A0A1Y7VJH8 109 aa4.79□□□□□ -1.64
Sec61a1-201ENSMUST00000032168 Krtap6-3A0A087WQL6 57 aa4.65□□□□□ -1.66
Sec61a1-201ENSMUST00000032168 Sprr2eO70556 76 aa4.65□□□□□ -1.66
Sec61a1-201ENSMUST00000032168 Krtap5-2Q9D5Z7 189 aa4.62□□□□□ -1.67
Sec61a1-201ENSMUST00000032168 Muc16A0A140LJ72 8478 aa4.6□□□□□ -1.67
Sec61a1-201ENSMUST00000032168 Krtap31-2Q8CAY5 177 aa4.58□□□□□ -1.68
Sec61a1-201ENSMUST00000032168 Krtap31-1Q9D644 177 aa4.57□□□□□ -1.68
Sec61a1-201ENSMUST00000032168 Gm10153A0A1B0GRL1 320 aa4.45□□□□□ -1.7
Sec61a1-201ENSMUST00000032168 Sprr2fO70557 76 aa4.45□□□□□ -1.7
Sec61a1-201ENSMUST00000032168 Krtap4-16Q91W93 202 aa4.4□□□□□ -1.7
Sec61a1-201ENSMUST00000032168 Kmt2dQ6PDK2 5588 aa4.38□□□□□ -1.71
Sec61a1-201ENSMUST00000032168 Hmcn1D3YXG0 5634 aa4.38□□□□□ -1.71
Sec61a1-201ENSMUST00000032168 A0A1Y7VLE6 161 aa4.32□□□□□ -1.72
Sec61a1-201ENSMUST00000032168 Mt3P28184 68 aa4.32□□□□□ -1.72
Sec61a1-201ENSMUST00000032168 Gm11554B1AQB2 190 aa4.3□□□□□ -1.72
Sec61a1-201ENSMUST00000032168 Gm11559Q9D3H7 191 aa4.26□□□□□ -1.73
Sec61a1-201ENSMUST00000032168 Gm10024A0A0A0MQA4 119 aa4.25□□□□□ -1.73
Sec61a1-201ENSMUST00000032168 Gm4553A0A1B0GSA9 284 aa4.23□□□□□ -1.73
Sec61a1-201ENSMUST00000032168 Muc19Q6PZE0 7524 aa4.22□□□□□ -1.73
Sec61a1-201ENSMUST00000032168 Gm45337A0A1B0GS71 263 aa4.18□□□□□ -1.74
Sec61a1-201ENSMUST00000032168 Gm2431E9Q8S1 172 aa4.17□□□□□ -1.74
Sec61a1-201ENSMUST00000032168 Krtap28-10A0A1Y7VP58 119 aa4.13□□□□□ -1.75
Sec61a1-201ENSMUST00000032168 Gm7544A0A1Y7VJ58 118 aa4.11□□□□□ -1.75
Sec61a1-201ENSMUST00000032168 Gm40460A0A1B0GR10 244 aa4.04□□□□□ -1.76
Sec61a1-201ENSMUST00000032168 Gm7579A0A1B0GRJ4 243 aa4.04□□□□□ -1.76
Sec61a1-201ENSMUST00000032168 Krtap5-5Q2TA51 241 aa4.04□□□□□ -1.76
Sec61a1-201ENSMUST00000032168 Krtap5-4Q62220 223 aa4.04□□□□□ -1.76
Sec61a1-201ENSMUST00000032168 DstQ91ZU6 7393 aaKnown RBP4.01□□□□□ -1.77
Sec61a1-201ENSMUST00000032168 Krtap28-13A0A087WQP5 138 aa3.99□□□□□ -1.77
Sec61a1-201ENSMUST00000032168 A030005L19RikA0A1Y7VIU2 113 aa3.98□□□□□ -1.77
Sec61a1-201ENSMUST00000032168 A030005K14RikA0A1Y7VNY1 122 aa3.92□□□□□ -1.78
Sec61a1-201ENSMUST00000032168 NebE9Q1W3 7152 aa3.88□□□□□ -1.79
Sec61a1-201ENSMUST00000032168 Gm11639A0A1D5RLM8 5808 aa3.77□□□□□ -1.81
Sec61a1-201ENSMUST00000032168 Gm39115A0A1B0GSH7 232 aa3.73□□□□□ -1.81
Sec61a1-201ENSMUST00000032168 1110025L11RikO09048 78 aa3.71□□□□□ -1.82
Sec61a1-201ENSMUST00000032168 Krtap6-5Q925H3 78 aa3.71□□□□□ -1.82
Sec61a1-201ENSMUST00000032168 Eppk1Q8R0W0 6548 aa3.68□□□□□ -1.82
Sec61a1-201ENSMUST00000032168 A0A286YCP9 139 aa3.64□□□□□ -1.83
Sec61a1-201ENSMUST00000032168 A030003K21RikA0A1Y7VIM3 128 aa3.62□□□□□ -1.83
Sec61a1-201ENSMUST00000032168 Gm6217A0A1Y7VJK9 128 aa3.62□□□□□ -1.83
Sec61a1-201ENSMUST00000032168 AhnakE9Q616 5656 aaKnown RBP3.54□□□□□ -1.84
Sec61a1-201ENSMUST00000032168 A0A1Y7VJ07 166 aa3.53□□□□□ -1.84
Sec61a1-201ENSMUST00000032168 A030014E15RikA0A1Y7VJV2 120 aa3.43□□□□□ -1.86
Sec61a1-201ENSMUST00000032168 Gpr98Q8VHN7 6298 aaKnown RBP3.34□□□□□ -1.88
Sec61a1-201ENSMUST00000032168 Gm10229O08631 77 aa3.29□□□□□ -1.88
Sec61a1-201ENSMUST00000032168 Gm11567Q9D141 195 aa3.22□□□□□ -1.89
Sec61a1-201ENSMUST00000032168 Sprr2bO70554 98 aa3.18□□□□□ -1.9
Sec61a1-201ENSMUST00000032168 Gm45618A0A1B0GSA0 219 aa3.16□□□□□ -1.9
Sec61a1-201ENSMUST00000032168 Krtap21-1Q925H4 128 aa3.04□□□□□ -1.92
Sec61a1-201ENSMUST00000032168 Gm29735A0A1B0GT06 219 aa3.03□□□□□ -1.92
Sec61a1-201ENSMUST00000032168 Phgr1Q8K0G7 91 aa2.92□□□□□ -1.94
Sec61a1-201ENSMUST00000032168 Krtap6-2O08884 159 aa2.79□□□□□ -1.96
Sec61a1-201ENSMUST00000032168 Krtap5-1Q64507 230 aa1.94□□□□□ -2.1
Sec61a1-201ENSMUST00000032168 Gm4559A4IF42 199 aa1.77□□□□□ -2.13
Retrieved 80 of 22,080 RNA–protein pairs in 947.7 ms