RNA–Protein interactions for RNA: ENSMUST00000026866.14

Sclt1-201, Transcript of Sodium channel and clathrin linker 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Sclt1, Length 3,005 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sclt1-201ENSMUST00000026866 Lce1bQ9D149 137 aa5.37□□□□□ -1.55
Sclt1-201ENSMUST00000026866 Lce3bQ9CQM7 98 aa5.3□□□□□ -1.56
Sclt1-201ENSMUST00000026866 Lce1fB9EJP6 147 aa5.28□□□□□ -1.56
Sclt1-201ENSMUST00000026866 Lce1a1Q9CQH5 143 aa5.28□□□□□ -1.56
Sclt1-201ENSMUST00000026866 Krtap4-13Q9D7P3 165 aa5.27□□□□□ -1.57
Sclt1-201ENSMUST00000026866 Gm10100J3QK64 120 aa5.24□□□□□ -1.57
Sclt1-201ENSMUST00000026866 2300003K06RikA2A4M0 262 aa5.22□□□□□ -1.57
Sclt1-201ENSMUST00000026866 Krtap19-4Q925H7 84 aa5.17□□□□□ -1.58
Sclt1-201ENSMUST00000026866 Sprr2kO70562 68 aa5.14□□□□□ -1.59
Sclt1-201ENSMUST00000026866 Muc16A0A140LJ72 8478 aa5.14□□□□□ -1.59
Sclt1-201ENSMUST00000026866 Gm10142J3KMP7 120 aa5.08□□□□□ -1.6
Sclt1-201ENSMUST00000026866 Krtap4-7Q9D732 168 aa5.05□□□□□ -1.6
Sclt1-201ENSMUST00000026866 Lce3cQ91V05 98 aa5.03□□□□□ -1.6
Sclt1-201ENSMUST00000026866 Lce1kJ3QP15 125 aa4.99□□□□□ -1.61
Sclt1-201ENSMUST00000026866 Lce3eF8VQJ0 98 aa4.97□□□□□ -1.61
Sclt1-201ENSMUST00000026866 Lce3fQ6PAI4 98 aa4.97□□□□□ -1.61
Sclt1-201ENSMUST00000026866 Lce3dE9Q8V1 98 aa4.96□□□□□ -1.62
Sclt1-201ENSMUST00000026866 ObscnA2AAJ9 8891 aaKnown RBP4.94□□□□□ -1.62
Sclt1-201ENSMUST00000026866 Sprr2iO70560 76 aa4.92□□□□□ -1.62
Sclt1-201ENSMUST00000026866 Lce1lQ9D1G7 135 aa4.9□□□□□ -1.63
Sclt1-201ENSMUST00000026866 A0A1Y7VJH8 109 aa4.86□□□□□ -1.63
Sclt1-201ENSMUST00000026866 Mt1P02802 61 aaKnown RBP4.86□□□□□ -1.63
Sclt1-201ENSMUST00000026866 Krtap31-1Q9D644 177 aa4.84□□□□□ -1.63
Sclt1-201ENSMUST00000026866 Krtap20-2E9Q0A8 60 aa4.82□□□□□ -1.64
Sclt1-201ENSMUST00000026866 Gm11568A2A4M2 211 aa4.8□□□□□ -1.64
Sclt1-201ENSMUST00000026866 Krtap9-1Q64526 186 aa4.8□□□□□ -1.64
Sclt1-201ENSMUST00000026866 Krtap4-16Q91W93 202 aa4.8□□□□□ -1.64
Sclt1-201ENSMUST00000026866 Krtap6-3A0A087WQL6 57 aa4.79□□□□□ -1.64
Sclt1-201ENSMUST00000026866 Sprr2hO70559 108 aa4.76□□□□□ -1.65
Sclt1-201ENSMUST00000026866 Lce3aQ497I5 98 aa4.75□□□□□ -1.65
Sclt1-201ENSMUST00000026866 Krtap5-2Q9D5Z7 189 aa4.71□□□□□ -1.66
Sclt1-201ENSMUST00000026866 Gm7544A0A1Y7VJ58 118 aa4.69□□□□□ -1.66
Sclt1-201ENSMUST00000026866 Krtap28-10A0A1Y7VP58 119 aa4.67□□□□□ -1.66
Sclt1-201ENSMUST00000026866 A0A1Y7VLE6 161 aa4.59□□□□□ -1.68
Sclt1-201ENSMUST00000026866 Sprr2fO70557 76 aa4.55□□□□□ -1.68
Sclt1-201ENSMUST00000026866 Macf1Q9QXZ0 7354 aaKnown RBP4.52□□□□□ -1.69
Sclt1-201ENSMUST00000026866 Sprr2eO70556 76 aa4.51□□□□□ -1.69
Sclt1-201ENSMUST00000026866 Gm10153A0A1B0GRL1 320 aa4.49□□□□□ -1.69
Sclt1-201ENSMUST00000026866 A030005L19RikA0A1Y7VIU2 113 aa4.46□□□□□ -1.69
Sclt1-201ENSMUST00000026866 Gm11559Q9D3H7 191 aa4.35□□□□□ -1.71
Sclt1-201ENSMUST00000026866 Gm4553A0A1B0GSA9 284 aa4.33□□□□□ -1.72
Sclt1-201ENSMUST00000026866 A030005K14RikA0A1Y7VNY1 122 aa4.32□□□□□ -1.72
Sclt1-201ENSMUST00000026866 Krtap28-13A0A087WQP5 138 aa4.31□□□□□ -1.72
Sclt1-201ENSMUST00000026866 Mt3P28184 68 aa4.31□□□□□ -1.72
Sclt1-201ENSMUST00000026866 Hmcn1D3YXG0 5634 aa4.3□□□□□ -1.72
Sclt1-201ENSMUST00000026866 Gm45337A0A1B0GS71 263 aa4.28□□□□□ -1.72
Sclt1-201ENSMUST00000026866 Gm11554B1AQB2 190 aa4.28□□□□□ -1.72
Sclt1-201ENSMUST00000026866 A030003K21RikA0A1Y7VIM3 128 aa4.24□□□□□ -1.73
Sclt1-201ENSMUST00000026866 Gm6217A0A1Y7VJK9 128 aa4.24□□□□□ -1.73
Sclt1-201ENSMUST00000026866 Gm2431E9Q8S1 172 aa4.24□□□□□ -1.73
Sclt1-201ENSMUST00000026866 Kmt2dQ6PDK2 5588 aa4.23□□□□□ -1.73
Sclt1-201ENSMUST00000026866 A0A286YCP9 139 aa4.22□□□□□ -1.73
Sclt1-201ENSMUST00000026866 Krtap31-2Q8CAY5 177 aa4.21□□□□□ -1.73
Sclt1-201ENSMUST00000026866 Muc19Q6PZE0 7524 aa4.21□□□□□ -1.74
Sclt1-201ENSMUST00000026866 Gm40460A0A1B0GR10 244 aa4.14□□□□□ -1.75
Sclt1-201ENSMUST00000026866 Gm7579A0A1B0GRJ4 243 aa4.14□□□□□ -1.75
Sclt1-201ENSMUST00000026866 Krtap5-5Q2TA51 241 aa4.14□□□□□ -1.75
Sclt1-201ENSMUST00000026866 Krtap5-4Q62220 223 aa4.14□□□□□ -1.75
Sclt1-201ENSMUST00000026866 Gm10024A0A0A0MQA4 119 aa4.1□□□□□ -1.75
Sclt1-201ENSMUST00000026866 Gm39115A0A1B0GSH7 232 aa3.86□□□□□ -1.79
Sclt1-201ENSMUST00000026866 A0A1Y7VJ07 166 aa3.84□□□□□ -1.8
Sclt1-201ENSMUST00000026866 DstQ91ZU6 7393 aaKnown RBP3.83□□□□□ -1.8
Sclt1-201ENSMUST00000026866 Eppk1Q8R0W0 6548 aa3.74□□□□□ -1.81
Sclt1-201ENSMUST00000026866 Gm11639A0A1D5RLM8 5808 aa3.72□□□□□ -1.81
Sclt1-201ENSMUST00000026866 1110025L11RikO09048 78 aa3.66□□□□□ -1.82
Sclt1-201ENSMUST00000026866 Krtap6-5Q925H3 78 aa3.66□□□□□ -1.82
Sclt1-201ENSMUST00000026866 AhnakE9Q616 5656 aaKnown RBP3.53□□□□□ -1.84
Sclt1-201ENSMUST00000026866 NebE9Q1W3 7152 aa3.42□□□□□ -1.86
Sclt1-201ENSMUST00000026866 A030014E15RikA0A1Y7VJV2 120 aa3.41□□□□□ -1.86
Sclt1-201ENSMUST00000026866 Gm45618A0A1B0GSA0 219 aa3.33□□□□□ -1.88
Sclt1-201ENSMUST00000026866 Gm10229O08631 77 aa3.25□□□□□ -1.89
Sclt1-201ENSMUST00000026866 Gpr98Q8VHN7 6298 aaKnown RBP3.23□□□□□ -1.89
Sclt1-201ENSMUST00000026866 Gm11567Q9D141 195 aa3.19□□□□□ -1.9
Sclt1-201ENSMUST00000026866 Sprr2bO70554 98 aa3.16□□□□□ -1.9
Sclt1-201ENSMUST00000026866 Gm29735A0A1B0GT06 219 aa3.11□□□□□ -1.91
Sclt1-201ENSMUST00000026866 Krtap21-1Q925H4 128 aa3.01□□□□□ -1.93
Sclt1-201ENSMUST00000026866 Phgr1Q8K0G7 91 aa2.89□□□□□ -1.95
Sclt1-201ENSMUST00000026866 Krtap6-2O08884 159 aa2.76□□□□□ -1.97
Sclt1-201ENSMUST00000026866 Krtap5-1Q64507 230 aa2□□□□□ -2.09
Sclt1-201ENSMUST00000026866 Gm4559A4IF42 199 aa1.81□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 2372.4 ms