RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, human

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-215	ENST00000641471	PPP1R13B	Q96KQ4	1090 aa		18.18	■□□□□ 0.5
PPT1-215	ENST00000641471	RNF26	Q9BY78	433 aa	Predicted RBP	18.18	■□□□□ 0.5
PPT1-215	ENST00000641471	SPATA31A5	Q5VU36	1347 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	SPATA31A7	Q8IWB4	1347 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	KCNQ2	O43526	872 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	UBASH3A	P57075	661 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	SF3B3	Q15393	1217 aa	Known RBP	18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	GNL3L	Q9NVN8	582 aa	Known RBP	18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	SERTAD1	Q9UHV2	236 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	MAN1B1	Q9UKM7	699 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	POSTN	Q15063	836 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	FANCL	Q9NW38	375 aa		18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	BSDC1	Q9NW68	430 aa	Predicted RBP	18.17	■□□□□ 0.5
PPT1-215	ENST00000641471	PSD	A5PKW4	1024 aa	Predicted RBP	18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	FAM205C	A6NFA0	338 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	POLR2D	O15514	142 aa	Known RBP	18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	CBFA2T2	O43439	604 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	FUT2	Q10981	343 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	DHX8	Q14562	1220 aa	Known RBP	18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	PKN1	Q16512	942 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	CLEC4G	Q6UXB4	293 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	ZNF579	Q8NAF0	562 aa	Known RBP	18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	SRPRB	Q9Y5M8	271 aa	Known RBP	18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	TMEM232	C9JQI7	657 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	SERPINC1	P01008	464 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	VSTM4	Q8IW00	320 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	LINC00116	Q8NCU8	138 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	FAM84B	Q96KN1	310 aa	Predicted RBP	18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	BRIP1	Q9BX63	1249 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	MINPP1	Q9UNW1	487 aa		18.16	■□□□□ 0.5
PPT1-215	ENST00000641471	SBF2	Q86WG5	1849 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	KIF2A	O00139	706 aa	Predicted RBP	18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	MYO1B	O43795	1136 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	NT5DC1	Q5TFE4	455 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	GRAMD1C	Q8IYS0	662 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	CABP5	Q9NP86	173 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	INTS13	Q9NVM9	706 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	VPS54	Q9P1Q0	977 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	ACTN4	O43707	911 aa	Known RBP	18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	ATP2B1	P20020	1258 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	CFAP100	Q494V2	611 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	USP49	Q70CQ1	688 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	KIF18A	Q8NI77	898 aa		18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	CELF1	Q92879	486 aa	Known RBP	18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	SMARCC1	Q92922	1105 aa	Predicted RBP	18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	HOOK1	Q9UJC3	728 aa	Known RBP	18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	ZNF215	Q9UL58	517 aa	Predicted RBP	18.15	■□□□□ 0.5
PPT1-215	ENST00000641471	PRDM1	O75626	825 aa		18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	PLEKHA8P1	O95397	391 aa		18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	SARS	P49591	514 aa	Known RBP	18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	PPP2R5B	Q15173	497 aa		18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	PTPN21	Q16825	1174 aa		18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	EARS2	Q5JPH6	523 aa	Known RBP	18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	PHF20	Q9BVI0	1012 aa		18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	CSRNP2	Q9H175	543 aa		18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	CEP131	Q9UPN4	1083 aa		18.14	■□□□□ 0.49
PPT1-215	ENST00000641471	FGR	P09769	529 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	KLRK1	P26718	216 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	EVX2	Q03828	476 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	FMR1	Q06787	632 aa	Known RBP eCLIP	18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	MORC3	Q14149	939 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	ZNF827	Q17R98	1081 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	CAVIN4	Q5BKX8	364 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	hCG_1642624	A0A1W2PR95	340 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	IFIT1B	Q5T764	474 aa	Known RBP	18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	PDILT	Q8N807	584 aa		18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.13	■□□□□ 0.49
PPT1-215	ENST00000641471	PRPF3	O43395	683 aa	Known RBP	18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	AKAP17A	Q02040	695 aa	Known RBP	18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	GOLGA8F	Q08AF8	430 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	GOLGA8DP	Q0D2H9	430 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	CTR9	Q6PD62	1173 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	BARGIN	Q6ZT62	677 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	TMX1	Q9H3N1	280 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	NRDC	O43847	1150 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	KRT2	P35908	639 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	TROAP	Q12815	778 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	SMARCE1	Q969G3	411 aa		18.12	■□□□□ 0.49
PPT1-215	ENST00000641471	WNT7A	O00755	349 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	ZNF18	P17022	549 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	KCNQ4	P56696	695 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	CBX1	P83916	185 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	HSP90AA4P	Q58FG1	418 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	BICDL1	Q6ZP65	573 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	SMIM5	Q71RC9	77 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	FBXO33	Q7Z6M2	555 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	CATIP	Q7Z7H3	387 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	NSUN4	Q96CB9	384 aa	Known RBP	18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	MED15	Q96RN5	788 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	ZMYND15	Q9H091	742 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	CNTNAP5	Q8WYK1	1306 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471		A0A087X0B3	334 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	TRIM75P	A6NK02	468 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	TOP1	P11387	765 aa	Known RBP	18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	TBC1D9B	Q66K14	1250 aa		18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	SMAP1	Q8IYB5	467 aa	Predicted RBP	18.11	■□□□□ 0.49
PPT1-215	ENST00000641471	RBM28	Q9NW13	759 aa	Known RBP	18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms