RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SH2B2O14492 632 aaPredicted RBP23.32■■□□□ 1.32
PHGDH-210ENST00000641115 HSP90AA1P07900 732 aaKnown RBP23.32■■□□□ 1.32
PHGDH-210ENST00000641115 HIRAP54198 1017 aaPredicted RBP23.32■■□□□ 1.32
PHGDH-210ENST00000641115 TFAP4Q01664 338 aa23.32■■□□□ 1.32
PHGDH-210ENST00000641115 SH2B1Q9NRF2 756 aaPredicted RBP23.32■■□□□ 1.32
PHGDH-210ENST00000641115 HERC5Q9UII4 1024 aaKnown RBP23.32■■□□□ 1.32
PHGDH-210ENST00000641115 TPCN1Q9ULQ1 816 aa23.32■■□□□ 1.32
PHGDH-210ENST00000641115 IGDCC4Q8TDY8 1250 aa23.31■■□□□ 1.32
PHGDH-210ENST00000641115 ZSCAN10Q96SZ4 725 aaPredicted RBP23.31■■□□□ 1.32
PHGDH-210ENST00000641115 TNKSO95271 1327 aa23.31■■□□□ 1.32
PHGDH-210ENST00000641115 SHMT1P34896 483 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 EPHX2P34913 555 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 WTAPQ15007 396 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 USP50Q70EL3 339 aaPredicted RBP23.3■■□□□ 1.32
PHGDH-210ENST00000641115 METTL16Q86W50 562 aaKnown RBP23.3■■□□□ 1.32
PHGDH-210ENST00000641115 PITPNM2Q9BZ72 1349 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 LIFRP42702 1097 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 APOBRQ0VD83 1088 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 NFXL1Q6ZNB6 911 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 DEFB129Q9H1M3 183 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 DNAJC18Q9H819 358 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 LY9Q9HBG7 655 aa23.3■■□□□ 1.32
PHGDH-210ENST00000641115 GPHNQ9NQX3 736 aaPredicted RBP23.3■■□□□ 1.32
PHGDH-210ENST00000641115 SCAF8Q9UPN6 1271 aaKnown RBP23.3■■□□□ 1.32
PHGDH-210ENST00000641115 CCDC178Q5BJE1 867 aa23.29■■□□□ 1.32
PHGDH-210ENST00000641115 TMTC2Q8N394 836 aa23.29■■□□□ 1.32
PHGDH-210ENST00000641115 NAP1L2Q9ULW6 460 aaPredicted RBP23.29■■□□□ 1.32
PHGDH-210ENST00000641115 PLIN4Q96Q06 1357 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 FAM196BA6NMK8 535 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 EVCP57679 992 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 ME3Q16798 604 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 SGMS1Q86VZ5 419 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 NEDD1Q8NHV4 660 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 CCDC17Q96LX7 622 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.28■■□□□ 1.322e-7■■■■□ 19.6
PHGDH-210ENST00000641115 PPP2R3BQ9Y5P8 575 aa23.28■■□□□ 1.32
PHGDH-210ENST00000641115 POLR2AP24928 1970 aaKnown RBP23.27■■□□□ 1.32
PHGDH-210ENST00000641115 KLF18A0A0U1RQI7 1052 aa23.27■■□□□ 1.32
PHGDH-210ENST00000641115 CCDC69A6NI79 296 aa23.27■■□□□ 1.32
PHGDH-210ENST00000641115 LARGE1O95461 756 aa23.27■■□□□ 1.32
PHGDH-210ENST00000641115 SEC23AQ15436 765 aa23.27■■□□□ 1.32
PHGDH-210ENST00000641115 ENAHQ8N8S7 591 aaPredicted RBP23.27■■□□□ 1.32
PHGDH-210ENST00000641115 DCPSQ96C86 337 aaKnown RBP23.27■■□□□ 1.32
PHGDH-210ENST00000641115 TCP11L1Q9NUJ3 509 aa23.27■■□□□ 1.32
PHGDH-210ENST00000641115 PGAP2Q9UHJ9 254 aa23.27■■□□□ 1.32
PHGDH-210ENST00000641115 GREB1LQ9C091 1923 aaPredicted RBP23.27■■□□□ 1.32
PHGDH-210ENST00000641115 TBC1D12O60347 775 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 CERKLQ49MI3 558 aaPredicted RBP23.26■■□□□ 1.31
PHGDH-210ENST00000641115 IFIT1BQ5T764 474 aaKnown RBP23.26■■□□□ 1.31
PHGDH-210ENST00000641115 TATDN1Q6P1N9 297 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 CDAN1Q8IWY9 1227 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 ZNF274Q96GC6 653 aaPredicted RBP23.26■■□□□ 1.31
PHGDH-210ENST00000641115 TEPSINQ96N21 525 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 TAF1DQ9H5J8 278 aaPredicted RBP23.26■■□□□ 1.31
PHGDH-210ENST00000641115 NMT2O60551 498 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 SLURP2P0DP57 97 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 AKR1B1P15121 316 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 STK3Q13188 491 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 CUL4AQ13619 759 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 HOOK2Q96ED9 719 aa23.26■■□□□ 1.31
PHGDH-210ENST00000641115 SLKQ9H2G2 1235 aaPredicted RBP23.26■■□□□ 1.31
PHGDH-210ENST00000641115 GOLGA8BA8MQT2 603 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 SYNE3Q6ZMZ3 975 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 PNMA8AQ86V59 439 aaPredicted RBP23.25■■□□□ 1.31
PHGDH-210ENST00000641115 DGKHQ86XP1 1220 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 SPRYD3Q8NCJ5 442 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 ZC3H15Q8WU90 426 aaKnown RBP23.25■■□□□ 1.31
PHGDH-210ENST00000641115 SENP2Q9HC62 589 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 IL17RBQ9NRM6 502 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 BRPF3Q9ULD4 1205 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 SLC12A7Q9Y666 1083 aa23.25■■□□□ 1.31
PHGDH-210ENST00000641115 MPHOSPH10O00566 681 aaKnown RBP23.24■■□□□ 1.31
PHGDH-210ENST00000641115 APOA5Q6Q788 366 aa23.24■■□□□ 1.31
PHGDH-210ENST00000641115 SULF1Q8IWU6 871 aa23.24■■□□□ 1.31
PHGDH-210ENST00000641115 PDIA3P30101 505 aaKnown RBP23.23■■□□□ 1.31
PHGDH-210ENST00000641115 EAPPQ56P03 285 aaPredicted RBP23.23■■□□□ 1.31
PHGDH-210ENST00000641115 CCDC83Q8IWF9 413 aa23.23■■□□□ 1.31
PHGDH-210ENST00000641115 GTF3C6Q969F1 213 aa23.23■■□□□ 1.31
PHGDH-210ENST00000641115 STX8Q9UNK0 236 aa23.23■■□□□ 1.31
PHGDH-210ENST00000641115 POTECB2RU33 542 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 PFKFB2O60825 505 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 MIGA2Q7L4E1 593 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 NECAB1Q8N987 351 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 CHMP4CQ96CF2 233 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 INTS4Q96HW7 963 aaKnown RBP23.22■■□□□ 1.31
PHGDH-210ENST00000641115 FOXD4L1Q9NU39 408 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 ZBTB43O43298 467 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 ABCB5Q2M3G0 1257 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 PPP4R3BQ5MIZ7 849 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 DCAF15Q66K64 600 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 RCSD1Q6JBY9 416 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 ZNF654Q8IZM8 581 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 CEP95Q96GE4 821 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 KAT14Q9H8E8 782 aa23.22■■□□□ 1.31
PHGDH-210ENST00000641115 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.22■■□□□ 1.31
PHGDH-210ENST00000641115 ATAD5Q96QE3 1844 aa23.21■■□□□ 1.31
PHGDH-210ENST00000641115 NBPF12Q5TAG4 269 aaPredicted RBP23.21■■□□□ 1.31
PHGDH-210ENST00000641115 TMEM179Q6ZVK1 233 aa23.21■■□□□ 1.31
PHGDH-210ENST00000641115 CATIPQ7Z7H3 387 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms