RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KIF20AO95235 890 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 DYNLL1P63167 89 aaKnown RBP16.66■□□□□ 0.26
SCARB2-221ENST00000640341 BMS1Q14692 1282 aaKnown RBP16.66■□□□□ 0.26
SCARB2-221ENST00000640341 TERF2Q15554 542 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 CDHR2Q9BYE9 1310 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 SLFN14P0C7P3 912 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 CDC25AP30304 524 aa16.66■□□□□ 0.26
SCARB2-221ENST00000640341 MROH5Q6ZUA9 1318 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 TRIM75PA6NK02 468 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 EVX2Q03828 476 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 PUF60Q9UHX1 559 aaKnown RBP16.65■□□□□ 0.26
SCARB2-221ENST00000640341 KCNQ4P56696 695 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 CCDC93Q567U6 631 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 TC2NQ8N9U0 490 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 LMTK3Q96Q04 1460 aa16.65■□□□□ 0.26
SCARB2-221ENST00000640341 EXOC5O00471 708 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 WNT7AO00755 349 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 TJP1Q07157 1748 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 NOL10Q9BSC4 688 aaKnown RBP16.64■□□□□ 0.25
SCARB2-221ENST00000640341 PODXL2Q9NZ53 605 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 PARP3Q9Y6F1 533 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 COL18A1P39060 1754 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 A0A087X0B3 334 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 NMT2O60551 498 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-221ENST00000640341 MDM2Q00987 491 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-221ENST00000640341 CHRNDQ07001 517 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
SCARB2-221ENST00000640341 NUTM2AQ8IVF1 878 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-221ENST00000640341 SYMPKQ92797 1274 aaKnown RBP16.64■□□□□ 0.25
SCARB2-221ENST00000640341 EEF2KMTQ96G04 330 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 DACH1Q9UI36 760 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 ATP6V1AP38606 617 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 MLKLQ8NB16 471 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 RASSF8Q8NHQ8 419 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 MED15Q96RN5 788 aa16.64■□□□□ 0.25
SCARB2-221ENST00000640341 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
SCARB2-221ENST00000640341 GLI3P10071 1580 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 PNMA6AP0CW24 399 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-221ENST00000640341 XBP1P17861 261 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 FGFR2P21802 821 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 GABPB1Q06547 395 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-221ENST00000640341 FAM47AQ5JRC9 791 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 IGSF22Q8N9C0 903 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 ESR2Q92731 530 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 PPP2R3AQ06190 1150 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 FOXP1Q9H334 677 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-221ENST00000640341 CEP131Q9UPN4 1083 aa16.63■□□□□ 0.25
SCARB2-221ENST00000640341 TFRCP02786 760 aaKnown RBP16.63■□□□□ 0.25
SCARB2-221ENST00000640341 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-221ENST00000640341 H2AFXP16104 143 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-221ENST00000640341 MCM7P33993 719 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 TMEM139Q8IV31 216 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 MRPL44Q9H9J2 332 aaKnown RBP16.62■□□□□ 0.25
SCARB2-221ENST00000640341 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
SCARB2-221ENST00000640341 RBL2Q08999 1139 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 STAG1Q8WVM7 1258 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-221ENST00000640341 PLIN2Q99541 437 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 VPS16Q9H269 839 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
SCARB2-221ENST00000640341 FHOD1Q9Y613 1164 aa16.62■□□□□ 0.25
SCARB2-221ENST00000640341 CATIPQ7Z7H3 387 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 KCND1Q9NSA2 647 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 MYO5AQ9Y4I1 1855 aaKnown RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 ACTN4O43707 911 aaKnown RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 KRT2P35908 639 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 MORC3Q14149 939 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 DHX8Q14562 1220 aaKnown RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 ALX1Q15699 326 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 PIK3AP1Q6ZUJ8 805 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 ENAHQ8N8S7 591 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 ENOX1Q8TC92 643 aaKnown RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 AKR1B15C9JRZ8 316 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-221ENST00000640341 TADA3O75528 432 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
SCARB2-221ENST00000640341 GYS2P54840 703 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 STX10O60499 249 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-221ENST00000640341 TNS2Q63HR2 1409 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 STK36Q9NRP7 1315 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 USP17L12C9JPN9 530 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 USP17L21D6R901 530 aa16.6■□□□□ 0.25
SCARB2-221ENST00000640341 ADAMTS2O95450 1211 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms