RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 HTTP42858 3142 aa17.88■□□□□ 0.45
TARDBP-231ENST00000639599 ZBTB7BO15156 539 aaPredicted RBP17.87■□□□□ 0.45
TARDBP-231ENST00000639599 EVI5O60447 810 aa17.87■□□□□ 0.45
TARDBP-231ENST00000639599 HMGCRP04035 888 aa17.87■□□□□ 0.45
TARDBP-231ENST00000639599 DYNLL1P63167 89 aaKnown RBP17.87■□□□□ 0.45
TARDBP-231ENST00000639599 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
TARDBP-231ENST00000639599 ADGRA1Q86SQ6 560 aa17.87■□□□□ 0.45
TARDBP-231ENST00000639599 EXOC6BQ9Y2D4 811 aa17.87■□□□□ 0.45
TARDBP-231ENST00000639599 RRP1BQ14684 758 aaKnown RBP17.86■□□□□ 0.45
TARDBP-231ENST00000639599 TTF1Q15361 905 aaPredicted RBP17.86■□□□□ 0.45
TARDBP-231ENST00000639599 CEP85Q6P2H3 762 aa17.86■□□□□ 0.45
TARDBP-231ENST00000639599 TMED8Q6PL24 325 aaPredicted RBP17.86■□□□□ 0.45
TARDBP-231ENST00000639599 TTC6Q86TZ1 520 aa17.86■□□□□ 0.45
TARDBP-231ENST00000639599 GPRC5AQ8NFJ5 357 aa17.86■□□□□ 0.45
TARDBP-231ENST00000639599 EAF2Q96CJ1 260 aaPredicted RBP17.86■□□□□ 0.45
TARDBP-231ENST00000639599 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.86■□□□□ 0.45
TARDBP-231ENST00000639599 CABP5Q9NP86 173 aa17.86■□□□□ 0.45
TARDBP-231ENST00000639599 HMMRO75330 724 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 RLBP1P12271 317 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 HERVK_113P62684 666 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 MAST2Q6P0Q8 1798 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 USP17L2Q6R6M4 530 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 MIER1Q8N108 512 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 CLASRPQ8N2M8 674 aaKnown RBP17.85■□□□□ 0.45
TARDBP-231ENST00000639599 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 NUDT12Q9BQG2 462 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 PAGR1Q9BTK6 254 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 HMX1Q9NP08 348 aaPredicted RBP17.85■□□□□ 0.45
TARDBP-231ENST00000639599 SERPINB13Q9UIV8 391 aa17.85■□□□□ 0.45
TARDBP-231ENST00000639599 APBB1O00213 710 aa17.84■□□□□ 0.45
TARDBP-231ENST00000639599 GH2P01242 217 aa17.84■□□□□ 0.45
TARDBP-231ENST00000639599 MAPK4P31152 587 aa17.84■□□□□ 0.45
TARDBP-231ENST00000639599 HOXA7P31268 230 aaPredicted RBP17.84■□□□□ 0.45
TARDBP-231ENST00000639599 FXR1P51114 621 aaKnown RBP eCLIP17.84■□□□□ 0.45
TARDBP-231ENST00000639599 USP14P54578 494 aa17.84■□□□□ 0.45
TARDBP-231ENST00000639599 ZYXQ15942 572 aaKnown RBP17.84■□□□□ 0.45
TARDBP-231ENST00000639599 DNAJC18Q9H819 358 aa17.84■□□□□ 0.45
TARDBP-231ENST00000639599 MORF4L1Q9UBU8 362 aa17.84■□□□□ 0.45
TARDBP-231ENST00000639599 ZBED9Q6R2W3 1325 aa17.83■□□□□ 0.44
TARDBP-231ENST00000639599 POLR3DP05423 398 aaPredicted RBP17.83■□□□□ 0.44
TARDBP-231ENST00000639599 IFIT2P09913 472 aaKnown RBP17.83■□□□□ 0.44
TARDBP-231ENST00000639599 CYP2B6P20813 491 aa17.83■□□□□ 0.44
TARDBP-231ENST00000639599 NECAB2Q7Z6G3 386 aa17.83■□□□□ 0.44
TARDBP-231ENST00000639599 TRMT44Q8IYL2 757 aaKnown RBP17.83■□□□□ 0.44
TARDBP-231ENST00000639599 PANK1Q8TE04 598 aa17.83■□□□□ 0.44
TARDBP-231ENST00000639599 P2RX7Q99572 595 aaKnown RBP17.83■□□□□ 0.44
TARDBP-231ENST00000639599 CHMP4BQ9H444 224 aaKnown RBP17.83■□□□□ 0.44
TARDBP-231ENST00000639599 IL1RAPL2Q9NP60 686 aa17.83■□□□□ 0.44
TARDBP-231ENST00000639599 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.44
TARDBP-231ENST00000639599 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
TARDBP-231ENST00000639599 RPTORQ8N122 1335 aa17.82■□□□□ 0.44
TARDBP-231ENST00000639599 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
TARDBP-231ENST00000639599 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
TARDBP-231ENST00000639599 CCNA1P78396 465 aa17.82■□□□□ 0.44
TARDBP-231ENST00000639599 ABCB5Q2M3G0 1257 aa17.82■□□□□ 0.44
TARDBP-231ENST00000639599 CERKLQ49MI3 558 aaPredicted RBP17.82■□□□□ 0.44
TARDBP-231ENST00000639599 WDR78Q5VTH9 848 aa17.82■□□□□ 0.44
TARDBP-231ENST00000639599 METTL16Q86W50 562 aaKnown RBP17.82■□□□□ 0.44
TARDBP-231ENST00000639599 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
TARDBP-231ENST00000639599 CRNKL1Q9BZJ0 848 aaKnown RBP17.82■□□□□ 0.44
TARDBP-231ENST00000639599 GLRX3O76003 335 aaKnown RBP17.81■□□□□ 0.44
TARDBP-231ENST00000639599 RGS2P41220 211 aa17.81■□□□□ 0.44
TARDBP-231ENST00000639599 UBE2Q1Q7Z7E8 422 aa17.81■□□□□ 0.44
TARDBP-231ENST00000639599 ANKLE1Q8NAG6 615 aa17.81■□□□□ 0.44
TARDBP-231ENST00000639599 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
TARDBP-231ENST00000639599 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
TARDBP-231ENST00000639599 PAWRQ96IZ0 340 aaKnown RBP17.81■□□□□ 0.44
TARDBP-231ENST00000639599 EHD4Q9H223 541 aa17.81■□□□□ 0.44
TARDBP-231ENST00000639599 DDX19BQ9UMR2 479 aa17.81■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L15C9J2P7 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L13C9JLJ4 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L11C9JVI0 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L18D6R9N7 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L22D6RA61 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L17D6RBQ6 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L19D6RCP7 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L20D6RJB6 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 MPHOSPH10O00566 681 aaKnown RBP17.8■□□□□ 0.44
TARDBP-231ENST00000639599 ERVK-9P63128 1117 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 ERVK-24P63145 666 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 USP17L24Q0WX57 530 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 SLC9C2Q5TAH2 1124 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 ANTXR1Q9H6X2 564 aa17.8■□□□□ 0.44
TARDBP-231ENST00000639599 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 JAG1P78504 1218 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 SHROOM1Q2M3G4 852 aaPredicted RBP17.79■□□□□ 0.44
TARDBP-231ENST00000639599 PLEKHH3Q7Z736 793 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
TARDBP-231ENST00000639599 AMOTL1Q8IY63 956 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 NBPF3Q9H094 633 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 CRISPLD2Q9H0B8 497 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 RBM27Q9P2N5 1060 aaKnown RBP17.79■□□□□ 0.44
TARDBP-231ENST00000639599 GJD2Q9UKL4 321 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 IVNS1ABPQ9Y6Y0 642 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 CENPFP49454 3210 aa17.79■□□□□ 0.44
TARDBP-231ENST00000639599 PHIPQ8WWQ0 1821 aa17.78■□□□□ 0.44
TARDBP-231ENST00000639599 GOLIM4O00461 696 aa17.78■□□□□ 0.44
TARDBP-231ENST00000639599 PRKAR2AP13861 404 aaKnown RBP17.78■□□□□ 0.44
TARDBP-231ENST00000639599 GPR142Q7Z601 462 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms