RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 CATIPQ7Z7H3 387 aa25.3■■□□□ 1.64
SCARB2-212ENST00000638663 C8orf76Q96K31 380 aa25.3■■□□□ 1.64
SCARB2-212ENST00000638663 CDK8P49336 464 aa25.29■■□□□ 1.64
SCARB2-212ENST00000638663 HDLBPQ00341 1268 aaKnown RBP25.29■■□□□ 1.64
SCARB2-212ENST00000638663 OTUD7BQ6GQQ9 843 aa25.29■■□□□ 1.64
SCARB2-212ENST00000638663 ZNF444Q8N0Y2 327 aaPredicted RBP25.29■■□□□ 1.64
SCARB2-212ENST00000638663 GPT2Q8TD30 523 aa25.29■■□□□ 1.64
SCARB2-212ENST00000638663 RASA1P20936 1047 aa25.29■■□□□ 1.64
SCARB2-212ENST00000638663 NT5C2P49902 561 aa25.29■■□□□ 1.64
SCARB2-212ENST00000638663 TMEM87AQ8NBN3 555 aa25.29■■□□□ 1.64
SCARB2-212ENST00000638663 ZSCAN16Q9H4T2 348 aaPredicted RBP25.29■■□□□ 1.64
SCARB2-212ENST00000638663 ZNF287Q9HBT7 754 aa25.29■■□□□ 1.64
SCARB2-212ENST00000638663 COL4A5P29400 1685 aa25.28■■□□□ 1.64
SCARB2-212ENST00000638663 CCDC196A0A1B0GTZ2 297 aa25.28■■□□□ 1.64
SCARB2-212ENST00000638663 TSPY3P0CV98 308 aa25.28■■□□□ 1.64
SCARB2-212ENST00000638663 TSPY8P0CW00 308 aa25.28■■□□□ 1.64
SCARB2-212ENST00000638663 SLC26A6Q9BXS9 759 aa25.28■■□□□ 1.64
SCARB2-212ENST00000638663 GADD45BO75293 160 aaPredicted RBP25.27■■□□□ 1.64
SCARB2-212ENST00000638663 RAD17O75943 681 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 IFNAR1P17181 557 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 SSRP1Q08945 709 aaKnown RBP25.27■■□□□ 1.64
SCARB2-212ENST00000638663 AIFM3Q96NN9 605 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 IL17RBQ9NRM6 502 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 GJB4Q9NTQ9 266 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 SERPINA10Q9UK55 444 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 KRT85P78386 507 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 RCSD1Q6JBY9 416 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 CMTR1Q8N1G2 835 aaKnown RBP25.27■■□□□ 1.64
SCARB2-212ENST00000638663 ALG1Q9BT22 464 aa25.27■■□□□ 1.64
SCARB2-212ENST00000638663 FMNL1O95466 1100 aaPredicted RBP25.26■■□□□ 1.63
SCARB2-212ENST00000638663 TROAPQ12815 778 aa25.26■■□□□ 1.63
SCARB2-212ENST00000638663 NFIAQ12857 509 aa25.26■■□□□ 1.63
SCARB2-212ENST00000638663 TTC6Q86TZ1 520 aa25.26■■□□□ 1.63
SCARB2-212ENST00000638663 CCDC82Q8N4S0 544 aa25.26■■□□□ 1.63
SCARB2-212ENST00000638663 FBXO18Q8NFZ0 1043 aa25.26■■□□□ 1.63
SCARB2-212ENST00000638663 OSBPL5Q9H0X9 879 aaPredicted RBP25.26■■□□□ 1.63
SCARB2-212ENST00000638663 VPS33BQ9H267 617 aa25.26■■□□□ 1.63
SCARB2-212ENST00000638663 TAOK2Q9UL54 1235 aa25.26■■□□□ 1.63
SCARB2-212ENST00000638663 DDAH1O94760 285 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 CD2APQ9Y5K6 639 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 STK36Q9NRP7 1315 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 UBE2Q2LH0YL09 131 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 PSMD14O00487 310 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 CALM1P0DP23 149 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 CALM2P0DP24 149 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 CALM3P0DP25 149 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 PTGER2P43116 358 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 CACNB3P54284 484 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 PPP2R5BQ15173 497 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 RSBN1LQ6PCB5 846 aaPredicted RBP25.25■■□□□ 1.63
SCARB2-212ENST00000638663 NIM1KQ8IY84 436 aa25.25■■□□□ 1.63
SCARB2-212ENST00000638663 TFIP11Q9UBB9 837 aaKnown RBP25.25■■□□□ 1.63
SCARB2-212ENST00000638663 CSPP1Q1MSJ5 1256 aa25.24■■□□□ 1.63
SCARB2-212ENST00000638663 DGKHQ86XP1 1220 aa25.24■■□□□ 1.63
SCARB2-212ENST00000638663 ECM29Q5VYK3 1845 aa25.24■■□□□ 1.63
SCARB2-212ENST00000638663 BRCA1P38398 1863 aaKnown RBP25.24■■□□□ 1.63
SCARB2-212ENST00000638663 DEKP35659 375 aaKnown RBP25.24■■□□□ 1.63
SCARB2-212ENST00000638663 NBPF11Q86T75 865 aa25.24■■□□□ 1.63
SCARB2-212ENST00000638663 TRIM22Q8IYM9 498 aa25.24■■□□□ 1.63
SCARB2-212ENST00000638663 CRACR2BQ8N4Y2 399 aaPredicted RBP25.24■■□□□ 1.63
SCARB2-212ENST00000638663 TCP11L1Q9NUJ3 509 aa25.24■■□□□ 1.63
SCARB2-212ENST00000638663 PSME4Q14997 1843 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 MBD3O95983 291 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 VIL1P09327 827 aaKnown RBP25.23■■□□□ 1.63
SCARB2-212ENST00000638663 CFAP100Q494V2 611 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 CCDC178Q5BJE1 867 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 CAVIN1Q6NZI2 390 aaKnown RBP25.23■■□□□ 1.63
SCARB2-212ENST00000638663 TAOK3Q9H2K8 898 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 KAT14Q9H8E8 782 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 ZNRF3Q9ULT6 936 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 MYO3BQ8WXR4 1341 aa25.23■■□□□ 1.63
SCARB2-212ENST00000638663 GABPAQ06546 454 aa25.22■■□□□ 1.63
SCARB2-212ENST00000638663 TPRNQ4KMQ1 711 aa25.22■■□□□ 1.63
SCARB2-212ENST00000638663 ZFPM1Q8IX07 1006 aa25.22■■□□□ 1.63
SCARB2-212ENST00000638663 RBM28Q9NW13 759 aaKnown RBP25.22■■□□□ 1.63
SCARB2-212ENST00000638663 BCS1LQ9Y276 419 aa25.22■■□□□ 1.63
SCARB2-212ENST00000638663 GUCY1A2P33402 732 aa25.22■■□□□ 1.63
SCARB2-212ENST00000638663 ANKS1AQ92625 1134 aa25.22■■□□□ 1.63
SCARB2-212ENST00000638663 TCP10Q12799 353 aa25.21■■□□□ 1.63
SCARB2-212ENST00000638663 NEDD1Q8NHV4 660 aa25.21■■□□□ 1.63
SCARB2-212ENST00000638663 SERPINB13Q9UIV8 391 aa25.21■■□□□ 1.63
SCARB2-212ENST00000638663 ZBTB12Q9Y330 459 aaPredicted RBP25.21■■□□□ 1.63
SCARB2-212ENST00000638663 PLEKHA8P1O95397 391 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 KRT40Q6A162 431 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 CTCFLQ8NI51 663 aaPredicted RBP25.2■■□□□ 1.62
SCARB2-212ENST00000638663 WASF1Q92558 559 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 IDI2Q9BXS1 227 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 SCAND2PQ9GZW5 306 aaPredicted RBP25.2■■□□□ 1.62
SCARB2-212ENST00000638663 TDRD3Q9H7E2 651 aaKnown RBP25.2■■□□□ 1.62
SCARB2-212ENST00000638663 RBM27Q9P2N5 1060 aaKnown RBP25.2■■□□□ 1.62
SCARB2-212ENST00000638663 FAM198AQ9UFP1 575 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 HLA-DOAP06340 250 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 UBE2HP62256 183 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 PNMA1Q8ND90 353 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 SPATA32Q96LK8 384 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 GMLQ99445 158 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 STX8Q9UNK0 236 aa25.2■■□□□ 1.62
SCARB2-212ENST00000638663 NFKBIEO00221 500 aa25.19■■□□□ 1.62
SCARB2-212ENST00000638663 DEXIO95424 95 aa25.19■■□□□ 1.62
SCARB2-212ENST00000638663 TRIM29Q14134 588 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms