RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ZSCAN10Q96SZ4 725 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-208ENST00000638372 GOLGA8HP0CJ92 632 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 NLRP10Q86W26 655 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 PNMA1Q8ND90 353 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 GJA3Q9Y6H8 435 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 KRT9P35527 623 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 MAP2K1Q02750 393 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-208ENST00000638372 CUL4AQ13619 759 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 CPXCR1Q8N123 301 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 REXO1Q8N1G1 1221 aaKnown RBP16.12■□□□□ 0.17
SCARB2-208ENST00000638372 RIOK3O14730 519 aaKnown RBP16.12■□□□□ 0.17
SCARB2-208ENST00000638372 HERC4Q5GLZ8 1057 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-208ENST00000638372 LARGE2Q8N3Y3 721 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 FERMT2Q96AC1 680 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 ARPP21Q9UBL0 812 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-208ENST00000638372 H0YIN7 160 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 CIAO1O76071 339 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 TBC1D7Q9P0N9 293 aa16.12■□□□□ 0.17
SCARB2-208ENST00000638372 LRMPQ12912 555 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 MSL1Q68DK7 614 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 KRT25Q7Z3Z0 450 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 TBC1D22AQ8WUA7 517 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 FTOQ9C0B1 505 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCARB2-208ENST00000638372 CLIC4Q9Y696 253 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 ADCY7P51828 1080 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 MTX1Q13505 466 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 FAM212AQ96EL1 285 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 PKNOX2Q96KN3 472 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
SCARB2-208ENST00000638372 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 M0R2C6 588 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 USP40Q9NVE5 1235 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 GJC1P36383 396 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 LONRF3Q496Y0 759 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 CNNM4Q6P4Q7 775 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 APOA5Q6Q788 366 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
SCARB2-208ENST00000638372 GOLGA6L10A0A0M3HER8 536 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 SMCO2A6NFE2 343 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 APBA3O96018 575 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 SCNN1DP51172 638 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 NDUFA8P51970 172 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 GTPBP4Q9BZE4 634 aaKnown RBP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 TMEM110-MUSTN1A8MSY1 372 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 PRKAB2O43741 272 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 RPL13P26373 211 aaKnown RBP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 EVCP57679 992 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 RNF187Q5TA31 235 aaPredicted RBP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 SELENOOQ9BVL4 669 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 BIN2Q9UBW5 565 aaPredicted RBP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 A0A087WWV3 80 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 SNAP23O00161 211 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 POLD1P28340 1107 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 NCAPH2Q6IBW4 605 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 MAEAQ7L5Y9 396 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 KIAA0825Q8IV33 1275 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 CFBP00751 764 aa16.1■□□□□ 0.17
SCARB2-208ENST00000638372 ZRSR2Q15696 482 aaKnown RBP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 FNBP4Q8N3X1 1017 aaPredicted RBP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 NSUN7Q8NE18 718 aaKnown RBP16.1■□□□□ 0.17
SCARB2-208ENST00000638372 ANKARQ7Z5J8 1434 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 STK32BQ9NY57 414 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 ZNF335Q9H4Z2 1342 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-208ENST00000638372 UBE4AQ14139 1066 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 CALCRLQ16602 461 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 DOK7Q18PE1 504 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 INF2Q27J81 1249 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 CABP7Q86V35 215 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 CERS3Q8IU89 383 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 PLVAPQ9BX97 442 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 ARHGEF10LQ9HCE6 1279 aa16.09■□□□□ 0.17
SCARB2-208ENST00000638372 KLRF2D3W0D1 207 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 HSF2BPO75031 334 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 U2AF2P26368 475 aaKnown RBP eCLIP16.08■□□□□ 0.17
SCARB2-208ENST00000638372 NELFCDQ8IXH7 590 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 EEF2KMTQ96G04 330 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 PLCD4Q9BRC7 762 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 RNF17Q9BXT8 1623 aaKnown RBP16.08■□□□□ 0.17
SCARB2-208ENST00000638372 GCOM1H8Y6P7 765 aaPredicted RBP16.08■□□□□ 0.17
SCARB2-208ENST00000638372 MYZAPP0CAP1 466 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 CMA1P23946 247 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 NECTIN1Q15223 517 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 CARD6Q9BX69 1037 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 IMPG2Q9BZV3 1241 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 GPHNQ9NQX3 736 aaPredicted RBP16.08■□□□□ 0.17
SCARB2-208ENST00000638372 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.17
SCARB2-208ENST00000638372 CPSF1Q10570 1443 aaKnown RBP16.08■□□□□ 0.16
SCARB2-208ENST00000638372 HAUS3Q68CZ6 603 aa16.08■□□□□ 0.16
SCARB2-208ENST00000638372 TSC1Q92574 1164 aa16.08■□□□□ 0.16
SCARB2-208ENST00000638372 ADKP55263 362 aaKnown RBP16.08■□□□□ 0.16
SCARB2-208ENST00000638372 DYNLL1P63167 89 aaKnown RBP16.08■□□□□ 0.16
SCARB2-208ENST00000638372 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
SCARB2-208ENST00000638372 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
SCARB2-208ENST00000638372 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms