RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SIPA1L1O43166 1804 aa22.93■■□□□ 1.26
CLN6-213ENST00000636212 GCLCP48506 637 aaPredicted RBP22.92■■□□□ 1.26
CLN6-213ENST00000636212 BACE1P56817 501 aa22.92■■□□□ 1.26
CLN6-213ENST00000636212 MTMR2Q13614 643 aa22.92■■□□□ 1.26
CLN6-213ENST00000636212 ZSCAN25Q6NSZ9 544 aa22.92■■□□□ 1.26
CLN6-213ENST00000636212 HAUS7Q99871 368 aa22.92■■□□□ 1.26
CLN6-213ENST00000636212 CABP5Q9NP86 173 aa22.92■■□□□ 1.26
CLN6-213ENST00000636212 IRX3P78415 501 aaPredicted RBP22.91■■□□□ 1.26
CLN6-213ENST00000636212 SH3TC2Q8TF17 1288 aa22.91■■□□□ 1.26
CLN6-213ENST00000636212 MCM9Q9NXL9 1143 aa22.91■■□□□ 1.26
CLN6-213ENST00000636212 ZSWIM8A7E2V4 1837 aa22.91■■□□□ 1.26
CLN6-213ENST00000636212 POTEFA5A3E0 1075 aa22.9■■□□□ 1.26
CLN6-213ENST00000636212 SMARCA5O60264 1052 aaPredicted RBP22.9■■□□□ 1.26
CLN6-213ENST00000636212 CTGFP29279 349 aa22.9■■□□□ 1.26
CLN6-213ENST00000636212 FAM110CQ1W6H9 321 aa22.9■■□□□ 1.26
CLN6-213ENST00000636212 CERKLQ49MI3 558 aaPredicted RBP22.9■■□□□ 1.26
CLN6-213ENST00000636212 TATDN1Q6P1N9 297 aa22.9■■□□□ 1.26
CLN6-213ENST00000636212 ANKRD13CQ8N6S4 541 aa22.9■■□□□ 1.26
CLN6-213ENST00000636212 EDC3Q96F86 508 aaKnown RBP22.9■■□□□ 1.26
CLN6-213ENST00000636212 DCTPP1Q9H773 170 aa22.9■■□□□ 1.26
CLN6-213ENST00000636212 BIN2Q9UBW5 565 aaPredicted RBP22.9■■□□□ 1.26
CLN6-213ENST00000636212 LOC285556D6RIA3 1793 aa22.9■■□□□ 1.26
CLN6-213ENST00000636212 TNPO2O14787 897 aaKnown RBP22.89■■□□□ 1.25
CLN6-213ENST00000636212 GH2P01242 217 aa22.89■■□□□ 1.25
CLN6-213ENST00000636212 GRK4P32298 578 aa22.89■■□□□ 1.25
CLN6-213ENST00000636212 ADD2P35612 726 aa22.89■■□□□ 1.25
CLN6-213ENST00000636212 AMOTL1Q8IY63 956 aa22.89■■□□□ 1.25
CLN6-213ENST00000636212 COA7Q96BR5 231 aa22.89■■□□□ 1.25
CLN6-213ENST00000636212 DDRGK1Q96HY6 314 aa22.89■■□□□ 1.25
CLN6-213ENST00000636212 ASCC2Q9H1I8 757 aaPredicted RBP22.89■■□□□ 1.25
CLN6-213ENST00000636212 ECHDC1Q9NTX5 307 aa22.89■■□□□ 1.25
CLN6-213ENST00000636212 TCRBV5S4A2TA0A5A2 114 aa22.88■■□□□ 1.25
CLN6-213ENST00000636212 MYCP01106 439 aaPredicted RBP22.88■■□□□ 1.25
CLN6-213ENST00000636212 UBXN2AP68543 259 aa22.88■■□□□ 1.25
CLN6-213ENST00000636212 ABCB5Q2M3G0 1257 aa22.88■■□□□ 1.25
CLN6-213ENST00000636212 USP17L2Q6R6M4 530 aa22.88■■□□□ 1.25
CLN6-213ENST00000636212 FEZ1Q99689 392 aa22.88■■□□□ 1.25
CLN6-213ENST00000636212 RBBP6Q7Z6E9 1792 aaKnown RBP22.88■■□□□ 1.25
CLN6-213ENST00000636212 RRP1P56182 461 aaKnown RBP22.87■■□□□ 1.25
CLN6-213ENST00000636212 JAG1P78504 1218 aa22.87■■□□□ 1.25
CLN6-213ENST00000636212 PRKCZQ05513 592 aa22.87■■□□□ 1.25
CLN6-213ENST00000636212 RAB3GAP1Q15042 981 aa22.87■■□□□ 1.25
CLN6-213ENST00000636212 LCORLQ8N3X6 602 aa22.87■■□□□ 1.25
CLN6-213ENST00000636212 SLAIN1Q8ND83 568 aa22.87■■□□□ 1.25
CLN6-213ENST00000636212 ARMT1Q9H993 441 aa22.87■■□□□ 1.25
CLN6-213ENST00000636212 NAV1Q8NEY1 1877 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 MBD4O95243 580 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 HOXA7P31268 230 aaPredicted RBP22.86■■□□□ 1.25
CLN6-213ENST00000636212 PLCD1P51178 756 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 USP14P54578 494 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 UBE3CQ15386 1083 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 SDR42E1Q8WUS8 393 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 YTHDC1Q96MU7 727 aaKnown RBP22.86■■□□□ 1.25
CLN6-213ENST00000636212 ATP8A2Q9NTI2 1148 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 ZBTB47Q9UFB7 747 aaPredicted RBP22.86■■□□□ 1.25
CLN6-213ENST00000636212 TAOK2Q9UL54 1235 aa22.86■■□□□ 1.25
CLN6-213ENST00000636212 MGAMO43451 1857 aa22.85■■□□□ 1.25
CLN6-213ENST00000636212 EN2P19622 333 aaPredicted RBP22.85■■□□□ 1.25
CLN6-213ENST00000636212 GTF3C2Q8WUA4 911 aaPredicted RBP22.85■■□□□ 1.25
CLN6-213ENST00000636212 DCP1AQ9NPI6 582 aaPredicted RBP22.85■■□□□ 1.25
CLN6-213ENST00000636212 SHROOM1Q2M3G4 852 aaPredicted RBP22.84■■□□□ 1.25
CLN6-213ENST00000636212 SWAP70Q9UH65 585 aa22.84■■□□□ 1.25
CLN6-213ENST00000636212 GABRQQ9UN88 632 aa22.84■■□□□ 1.25
CLN6-213ENST00000636212 MPHOSPH10O00566 681 aaKnown RBP22.83■■□□□ 1.25
CLN6-213ENST00000636212 SHMT1P34896 483 aa22.83■■□□□ 1.25
CLN6-213ENST00000636212 FLT3LGP49771 235 aa22.83■■□□□ 1.25
CLN6-213ENST00000636212 NKX2-3Q8TAU0 364 aa22.83■■□□□ 1.25
CLN6-213ENST00000636212 ADCY3O60266 1144 aa22.82■■□□□ 1.24
CLN6-213ENST00000636212 ZYXQ15942 572 aaKnown RBP22.82■■□□□ 1.24
CLN6-213ENST00000636212 LRRFIP1Q32MZ4 808 aaKnown RBP22.82■■□□□ 1.24
CLN6-213ENST00000636212 PRPF38BQ5VTL8 546 aaKnown RBP22.82■■□□□ 1.24
CLN6-213ENST00000636212 CCAR1Q8IX12 1150 aaKnown RBP22.82■■□□□ 1.24
CLN6-213ENST00000636212 PXYLP1Q8TE99 480 aa22.82■■□□□ 1.24
CLN6-213ENST00000636212 DDX60LQ5H9U9 1706 aaKnown RBP22.82■■□□□ 1.24
CLN6-213ENST00000636212 HERVK_113P62684 666 aa22.81■■□□□ 1.24
CLN6-213ENST00000636212 GABPAQ06546 454 aa22.81■■□□□ 1.24
CLN6-213ENST00000636212 IRF5Q13568 498 aa22.81■■□□□ 1.24
CLN6-213ENST00000636212 C12orf42Q96LP6 360 aa22.81■■□□□ 1.24
CLN6-213ENST00000636212 P2RX7Q99572 595 aaKnown RBP22.81■■□□□ 1.24
CLN6-213ENST00000636212 EMILIN3Q9NT22 766 aa22.81■■□□□ 1.24
CLN6-213ENST00000636212 MORF4L1Q9UBU8 362 aa22.81■■□□□ 1.24
CLN6-213ENST00000636212 SLC4A4Q9Y6R1 1079 aa22.81■■□□□ 1.24
CLN6-213ENST00000636212 USP17L15C9J2P7 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L13C9JLJ4 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L11C9JVI0 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L18D6R9N7 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L22D6RA61 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L17D6RBQ6 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L19D6RCP7 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L20D6RJB6 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 ERC2O15083 957 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 USP17L24Q0WX57 530 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 GPRC5AQ8NFJ5 357 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 KIAA1683Q9H0B3 1180 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 RNF208Q9H0X6 261 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 PCDHB15Q9Y5E8 787 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 HTTP42858 3142 aa22.8■■□□□ 1.24
CLN6-213ENST00000636212 MYH7P12883 1935 aa22.79■■□□□ 1.24
CLN6-213ENST00000636212 PRKAB2O43741 272 aa22.79■■□□□ 1.24
CLN6-213ENST00000636212 CCL5P13501 91 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms