RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 SHROOM1Q2M3G4 852 aaPredicted RBP23.2■■□□□ 1.3
SMN2-215ENST00000628696 ITPRIPQ8IWB1 547 aa23.2■■□□□ 1.3
SMN2-215ENST00000628696 PAWRQ96IZ0 340 aaKnown RBP23.2■■□□□ 1.3
SMN2-215ENST00000628696 P2RX7Q99572 595 aaKnown RBP23.2■■□□□ 1.3
SMN2-215ENST00000628696 CRISPLD2Q9H0B8 497 aa23.2■■□□□ 1.3
SMN2-215ENST00000628696 DNAJC18Q9H819 358 aa23.2■■□□□ 1.3
SMN2-215ENST00000628696 GJD2Q9UKL4 321 aa23.2■■□□□ 1.3
SMN2-215ENST00000628696 HMGCRP04035 888 aa23.19■■□□□ 1.3
SMN2-215ENST00000628696 HLA-DOAP06340 250 aa23.19■■□□□ 1.3
SMN2-215ENST00000628696 ZNF512BQ96KM6 892 aaPredicted RBP23.19■■□□□ 1.3
SMN2-215ENST00000628696 TLR7Q9NYK1 1049 aaKnown RBP23.19■■□□□ 1.3
SMN2-215ENST00000628696 DBNLQ9UJU6 430 aaKnown RBP23.19■■□□□ 1.3
SMN2-215ENST00000628696 MYH1P12882 1939 aa23.18■■□□□ 1.3
SMN2-215ENST00000628696 C19orf81C9J6K1 198 aa23.18■■□□□ 1.3
SMN2-215ENST00000628696 USP17L10C9JJH3 530 aa23.18■■□□□ 1.3
SMN2-215ENST00000628696 PEX10O60683 326 aa23.18■■□□□ 1.3
SMN2-215ENST00000628696 IDH1O75874 414 aaKnown RBP23.18■■□□□ 1.3
SMN2-215ENST00000628696 TRIM32Q13049 653 aa23.18■■□□□ 1.3
SMN2-215ENST00000628696 MORF4L1Q9UBU8 362 aa23.18■■□□□ 1.3
SMN2-215ENST00000628696 ZBTB21Q9ULJ3 1066 aa23.18■■□□□ 1.3
SMN2-215ENST00000628696 NOP58Q9Y2X3 529 aaKnown RBP23.18■■□□□ 1.3
SMN2-215ENST00000628696 CYP2B6P20813 491 aa23.17■■□□□ 1.3
SMN2-215ENST00000628696 HOXA7P31268 230 aaPredicted RBP23.17■■□□□ 1.3
SMN2-215ENST00000628696 NECAB2Q7Z6G3 386 aa23.17■■□□□ 1.3
SMN2-215ENST00000628696 METTL16Q86W50 562 aaKnown RBP23.17■■□□□ 1.3
SMN2-215ENST00000628696 MIGA1Q8NAN2 632 aa23.17■■□□□ 1.3
SMN2-215ENST00000628696 HERVK_113P62684 666 aa23.16■■□□□ 1.3
SMN2-215ENST00000628696 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
SMN2-215ENST00000628696 GPRC5AQ8NFJ5 357 aa23.16■■□□□ 1.3
SMN2-215ENST00000628696 DIS3LQ8TF46 1054 aaKnown RBP23.16■■□□□ 1.3
SMN2-215ENST00000628696 EAF2Q96CJ1 260 aaPredicted RBP23.16■■□□□ 1.3
SMN2-215ENST00000628696 HMX1Q9NP08 348 aaPredicted RBP23.16■■□□□ 1.3
SMN2-215ENST00000628696 GINM1Q9NU53 330 aa23.16■■□□□ 1.3
SMN2-215ENST00000628696 PLXNB2O15031 1838 aa23.16■■□□□ 1.3
SMN2-215ENST00000628696 RPTORQ8N122 1335 aa23.15■■□□□ 1.3
SMN2-215ENST00000628696 IGSF3O75054 1194 aa23.15■■□□□ 1.3
SMN2-215ENST00000628696 RLBP1P12271 317 aa23.15■■□□□ 1.3
SMN2-215ENST00000628696 USP5P45974 858 aa23.15■■□□□ 1.3
SMN2-215ENST00000628696 CCAR1Q8IX12 1150 aaKnown RBP23.15■■□□□ 1.3
SMN2-215ENST00000628696 MAGEB6Q8N7X4 407 aa23.15■■□□□ 1.3
SMN2-215ENST00000628696 TXNRD2Q9NNW7 524 aa23.15■■□□□ 1.3
SMN2-215ENST00000628696 NDUFB9Q9Y6M9 179 aa23.15■■□□□ 1.3
SMN2-215ENST00000628696 ALPK3Q96L96 1907 aa23.14■■□□□ 1.3
SMN2-215ENST00000628696 TRIB2Q92519 343 aa23.14■■□□□ 1.29
SMN2-215ENST00000628696 NUDT12Q9BQG2 462 aa23.14■■□□□ 1.29
SMN2-215ENST00000628696 PAGR1Q9BTK6 254 aa23.14■■□□□ 1.29
SMN2-215ENST00000628696 GH2P01242 217 aa23.13■■□□□ 1.29
SMN2-215ENST00000628696 USP17L2Q6R6M4 530 aa23.13■■□□□ 1.29
SMN2-215ENST00000628696 PRO3102Q9H379 93 aa23.13■■□□□ 1.29
SMN2-215ENST00000628696 RBPJLQ9UBG7 517 aa23.13■■□□□ 1.29
SMN2-215ENST00000628696 PDE3AQ14432 1141 aa23.12■■□□□ 1.29
SMN2-215ENST00000628696 ZYXQ15942 572 aaKnown RBP23.12■■□□□ 1.29
SMN2-215ENST00000628696 Q3C1V9 767 aa23.12■■□□□ 1.29
SMN2-215ENST00000628696 ANKLE1Q8NAG6 615 aa23.12■■□□□ 1.29
SMN2-215ENST00000628696 EMILIN3Q9NT22 766 aa23.12■■□□□ 1.29
SMN2-215ENST00000628696 STAP2Q9UGK3 403 aa23.12■■□□□ 1.29
SMN2-215ENST00000628696 ERVK-9P63128 1117 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 ERVK-24P63145 666 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 MAP3K12Q12852 859 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 AACSQ86V21 672 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 FEZ1Q99689 392 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 NBPF3Q9H094 633 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 ANTXR1Q9H6X2 564 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 CWC22Q9HCG8 908 aaKnown RBP23.11■■□□□ 1.29
SMN2-215ENST00000628696 EXOC6BQ9Y2D4 811 aa23.11■■□□□ 1.29
SMN2-215ENST00000628696 PRKAR2AP13861 404 aaKnown RBP23.1■■□□□ 1.29
SMN2-215ENST00000628696 MAPK4P31152 587 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 RAB3GAP1Q15042 981 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 CEP85Q6P2H3 762 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 CERS3Q8IU89 383 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 C7orf61Q8IZ16 206 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 SOCS4Q8WXH5 440 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 PORCNQ9H237 461 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 SERPINB13Q9UIV8 391 aa23.1■■□□□ 1.29
SMN2-215ENST00000628696 GTF3C2Q8WUA4 911 aaPredicted RBP23.09■■□□□ 1.29
SMN2-215ENST00000628696 DDX60LQ5H9U9 1706 aaKnown RBP23.08■■□□□ 1.29
SMN2-215ENST00000628696 RANBP2P49792 3224 aaKnown RBP23.08■■□□□ 1.29
SMN2-215ENST00000628696 XRCC5P13010 732 aaKnown RBP23.08■■□□□ 1.29
SMN2-215ENST00000628696 ZKSCAN1P17029 563 aaPredicted RBP23.08■■□□□ 1.29
SMN2-215ENST00000628696 CERKLQ49MI3 558 aaPredicted RBP23.08■■□□□ 1.29
SMN2-215ENST00000628696 TATDN1Q6P1N9 297 aa23.08■■□□□ 1.29
SMN2-215ENST00000628696 GPR142Q7Z601 462 aa23.08■■□□□ 1.29
SMN2-215ENST00000628696 PLEKHH3Q7Z736 793 aa23.08■■□□□ 1.29
SMN2-215ENST00000628696 TTC6Q86TZ1 520 aa23.08■■□□□ 1.29
SMN2-215ENST00000628696 ERC1Q8IUD2 1116 aa23.08■■□□□ 1.29
SMN2-215ENST00000628696 ZMYND8Q9ULU4 1186 aaPredicted RBP23.08■■□□□ 1.29
SMN2-215ENST00000628696 SZT2Q5T011 3432 aa23.08■■□□□ 1.28
SMN2-215ENST00000628696 USP17L15C9J2P7 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L13C9JLJ4 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L11C9JVI0 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L18D6R9N7 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L22D6RA61 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L17D6RBQ6 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L19D6RCP7 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L20D6RJB6 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 RGS2P41220 211 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 USP17L24Q0WX57 530 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 ABCB5Q2M3G0 1257 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 MAP3K21Q5TCX8 1036 aa23.07■■□□□ 1.28
SMN2-215ENST00000628696 TRMT44Q8IYL2 757 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms