RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 SH3TC1Q8TE82 1336 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 LTBP3Q9NS15 1303 aa6.39□□□□□ -1.39
RPRD1B-209ENST00000622494 PI4KAP2A4QPH2 592 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 SNAP23O00161 211 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 IRS4O14654 1257 aaPredicted RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 RAD17O75943 681 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 EGFRP00533 1210 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 VSIG8P0DPA2 414 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 ATP4AP20648 1035 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 ITGA6P23229 1130 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 KLRK1P26718 216 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 EPS15P42566 896 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 CCDC27Q2M243 656 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 TWISTNBQ3B726 338 aaPredicted RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 PARP10Q53GL7 1025 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 EAPPQ56P03 285 aaPredicted RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 MAP1SQ66K74 1059 aaPredicted RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 PPP1R42Q7Z4L9 355 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 PI4KAP1Q8N8J0 262 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 SCG3Q8WXD2 468 aaKnown RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 NANOS1Q8WY41 292 aaKnown RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 RBM17Q96I25 401 aaKnown RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 HINFPQ9BQA5 517 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 DBF4Q9UBU7 674 aaPredicted RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 SCAF8Q9UPN6 1271 aaKnown RBP6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 USTQ9Y2C2 406 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 KDM2BQ8NHM5 1336 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 SCN4AP35499 1836 aa6.38□□□□□ -1.39
RPRD1B-209ENST00000622494 POLR2AP24928 1970 aaKnown RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 RTL9Q8NET4 1388 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 ASTN2O75129 1339 aaPredicted RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 ZNF521Q96K83 1311 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 FZD9O00144 591 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 TRAF5O00463 557 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 PPIP5K2O43314 1243 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 PPP1R12BO60237 982 aaPredicted RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 F11P03951 625 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 THBS1P07996 1170 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 VEGFAP15692 232 aaPredicted RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 MSX1P28360 303 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 EPHA10Q5JZY3 1008 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 SH3PXD2AQ5TCZ1 1133 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 WDR63Q8IWG1 891 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 C16orf71Q8IYS4 520 aaPredicted RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 GMCL1Q96IK5 515 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 CRAMP1Q96RY5 1269 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 MXD3Q9BW11 206 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 BCL2L13Q9BXK5 485 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 TAF1DQ9H5J8 278 aaPredicted RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 DBNDD1Q9H9R9 158 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 CUEDC1Q9NWM3 386 aaPredicted RBP6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 HYPKQ9NX55 129 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 POLLQ9UGP5 575 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 ATP6V0A2Q9Y487 856 aa6.37□□□□□ -1.39
RPRD1B-209ENST00000622494 VAMP4O75379 141 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 LGR5O75473 907 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 HOXB7P09629 217 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 TXLNAP40222 546 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 GMPSP49915 693 aaPredicted RBP6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 CXCL9Q07325 125 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 GRAPQ13588 217 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 LBRQ14739 615 aaKnown RBP6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 C1orf53Q5VUE5 145 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 TRIM22Q8IYM9 498 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 TRPM4Q8TD43 1214 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 METTL22Q9BUU2 404 aaPredicted RBP6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 GREM2Q9H772 168 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 CXXC1Q9P0U4 656 aaPredicted RBP6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 TNNQ9UQP3 1299 aa6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 GPC6Q9Y625 555 aaPredicted RBP6.36□□□□□ -1.39
RPRD1B-209ENST00000622494 ZBED9Q6R2W3 1325 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 NEURL1BA8MQ27 555 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 ALDH1B1P30837 517 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 EPHX2P34913 555 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 CASP7P55210 303 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 SLFN5Q08AF3 891 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 UBAP2LQ14157 1087 aaKnown RBP6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 HSP90AB3PQ58FF7 597 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 DPP8Q6V1X1 898 aaPredicted RBP6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 DDX46Q7L014 1031 aaKnown RBP6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 UBE3BQ7Z3V4 1068 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 TRMT2AQ8IZ69 625 aaKnown RBP6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 RTKN2Q8IZC4 609 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 RETREG2Q8NC44 543 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 SMC1BQ8NDV3 1235 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 PSMD1Q99460 953 aa6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 CWC25Q9NXE8 425 aaPredicted RBP6.35□□□□□ -1.39
RPRD1B-209ENST00000622494 PSME4Q14997 1843 aa6.34□□□□□ -1.39
RPRD1B-209ENST00000622494 PRMT3O60678 531 aa6.34□□□□□ -1.39
RPRD1B-209ENST00000622494 PCCAP05165 728 aaPredicted RBP6.34□□□□□ -1.39
RPRD1B-209ENST00000622494 VEGFBP49765 207 aa6.34□□□□□ -1.39
RPRD1B-209ENST00000622494 FKBP5Q13451 457 aaPredicted RBP6.34□□□□□ -1.39
RPRD1B-209ENST00000622494 SF3B3Q15393 1217 aaKnown RBP6.34□□□□□ -1.39
RPRD1B-209ENST00000622494 DBN1Q16643 649 aa6.34□□□□□ -1.39
RPRD1B-209ENST00000622494 CCDC30Q5VVM6 783 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms