RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SSRP1Q08945 709 aaKnown RBP25■■□□□ 1.59
SPAST-204ENST00000621856 NTRK3Q16288 839 aa25■■□□□ 1.59
SPAST-204ENST00000621856 DALRD3Q5D0E6 543 aaKnown RBP25■■□□□ 1.59
SPAST-204ENST00000621856 APOBEC3HQ6NTF7 200 aaKnown RBP25■■□□□ 1.59
SPAST-204ENST00000621856 FAM173BQ6P4H8 233 aa25■■□□□ 1.59
SPAST-204ENST00000621856 C16orf86Q6ZW13 317 aa25■■□□□ 1.59
SPAST-204ENST00000621856 FANCBQ8NB91 859 aa25■■□□□ 1.59
SPAST-204ENST00000621856 MRIQ9BWK5 157 aa25■■□□□ 1.59
SPAST-204ENST00000621856 WDHD1O75717 1129 aaPredicted RBP24.99■■□□□ 1.59
SPAST-204ENST00000621856 MBD3O95983 291 aa24.99■■□□□ 1.59
SPAST-204ENST00000621856 TSPY3P0CV98 308 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 TSPY8P0CW00 308 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 CALM1P0DP23 149 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 CALM2P0DP24 149 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 CALM3P0DP25 149 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 IFNAR1P17181 557 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 DEKP35659 375 aaKnown RBP24.98■■□□□ 1.59
SPAST-204ENST00000621856 CDK8P49336 464 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 GPT2Q8TD30 523 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 ALG1Q9BT22 464 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 SLC26A6Q9BXS9 759 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 STK36Q9NRP7 1315 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 MYH15Q9Y2K3 1946 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 DDAH1O94760 285 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 PPP2R5BQ15173 497 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 CCDC178Q5BJE1 867 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 TTC6Q86TZ1 520 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 VPS33BQ9H267 617 aa24.98■■□□□ 1.59
SPAST-204ENST00000621856 DDX4Q9NQI0 724 aaKnown RBP24.98■■□□□ 1.59
SPAST-204ENST00000621856 PSDA5PKW4 1024 aaPredicted RBP24.97■■□□□ 1.59
SPAST-204ENST00000621856 FMNL1O95466 1100 aaPredicted RBP24.97■■□□□ 1.59
SPAST-204ENST00000621856 RASA1P20936 1047 aa24.97■■□□□ 1.59
SPAST-204ENST00000621856 OTUD7BQ6GQQ9 843 aa24.97■■□□□ 1.59
SPAST-204ENST00000621856 TRIM22Q8IYM9 498 aa24.97■■□□□ 1.59
SPAST-204ENST00000621856 GADD45BO75293 160 aaPredicted RBP24.96■■□□□ 1.59
SPAST-204ENST00000621856 FBXO18Q8NFZ0 1043 aa24.96■■□□□ 1.59
SPAST-204ENST00000621856 SERPINA10Q9UK55 444 aa24.96■■□□□ 1.59
SPAST-204ENST00000621856 BRCA1P38398 1863 aaKnown RBP24.96■■□□□ 1.59
SPAST-204ENST00000621856 WASF1Q92558 559 aa24.95■■□□□ 1.59
SPAST-204ENST00000621856 RBM28Q9NW13 759 aaKnown RBP24.95■■□□□ 1.59
SPAST-204ENST00000621856 CAVIN1Q6NZI2 390 aaKnown RBP24.95■■□□□ 1.58
SPAST-204ENST00000621856 NIM1KQ8IY84 436 aa24.95■■□□□ 1.58
SPAST-204ENST00000621856 AIFM3Q96NN9 605 aa24.95■■□□□ 1.58
SPAST-204ENST00000621856 OSBPL5Q9H0X9 879 aaPredicted RBP24.95■■□□□ 1.58
SPAST-204ENST00000621856 KAT14Q9H8E8 782 aa24.95■■□□□ 1.58
SPAST-204ENST00000621856 TAOK2Q9UL54 1235 aa24.95■■□□□ 1.58
SPAST-204ENST00000621856 PCDHAC2Q9Y5I4 1007 aa24.95■■□□□ 1.58
SPAST-204ENST00000621856 MYO3BQ8WXR4 1341 aa24.94■■□□□ 1.58
SPAST-204ENST00000621856 RAD17O75943 681 aa24.94■■□□□ 1.58
SPAST-204ENST00000621856 TRIM29Q14134 588 aa24.94■■□□□ 1.58
SPAST-204ENST00000621856 DGKHQ86XP1 1220 aa24.94■■□□□ 1.58
SPAST-204ENST00000621856 CCDC82Q8N4S0 544 aa24.94■■□□□ 1.58
SPAST-204ENST00000621856 IL17RBQ9NRM6 502 aa24.94■■□□□ 1.58
SPAST-204ENST00000621856 TCP11L1Q9NUJ3 509 aa24.94■■□□□ 1.58
SPAST-204ENST00000621856 TFIP11Q9UBB9 837 aaKnown RBP24.94■■□□□ 1.58
SPAST-204ENST00000621856 TROAPQ12815 778 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 RCSD1Q6JBY9 416 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 RSBN1LQ6PCB5 846 aaPredicted RBP24.93■■□□□ 1.58
SPAST-204ENST00000621856 CMTR1Q8N1G2 835 aaKnown RBP24.93■■□□□ 1.58
SPAST-204ENST00000621856 CRACR2BQ8N4Y2 399 aaPredicted RBP24.93■■□□□ 1.58
SPAST-204ENST00000621856 RGS22Q8NE09 1264 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 CTCFLQ8NI51 663 aaPredicted RBP24.93■■□□□ 1.58
SPAST-204ENST00000621856 SGIP1Q9BQI5 828 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 SCAND2PQ9GZW5 306 aaPredicted RBP24.93■■□□□ 1.58
SPAST-204ENST00000621856 GJB4Q9NTQ9 266 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 CD2APQ9Y5K6 639 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 COL4A5P29400 1685 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 MYH6P13533 1939 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 MYH8P13535 1937 aa24.93■■□□□ 1.58
SPAST-204ENST00000621856 UBE2HP62256 183 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 PSMD14O00487 310 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 HLA-DOAP06340 250 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 NFIAQ12857 509 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 CFAP100Q494V2 611 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 TPRNQ4KMQ1 711 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 NBPF11Q86T75 865 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 ANKS1AQ92625 1134 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 SPATA32Q96LK8 384 aa24.92■■□□□ 1.58
SPAST-204ENST00000621856 FER1L6Q2WGJ9 1857 aa24.91■■□□□ 1.58
SPAST-204ENST00000621856 AKAP17AQ02040 695 aaKnown RBP24.91■■□□□ 1.58
SPAST-204ENST00000621856 NEDD1Q8NHV4 660 aa24.91■■□□□ 1.58
SPAST-204ENST00000621856 ZNF396Q96N95 335 aaPredicted RBP24.91■■□□□ 1.58
SPAST-204ENST00000621856 TAOK3Q9H2K8 898 aa24.91■■□□□ 1.58
SPAST-204ENST00000621856 CFAP45Q9UL16 551 aa24.91■■□□□ 1.58
SPAST-204ENST00000621856 ZNRF3Q9ULT6 936 aa24.91■■□□□ 1.58
SPAST-204ENST00000621856 DEXIO95424 95 aa24.9■■□□□ 1.58
SPAST-204ENST00000621856 VIL1P09327 827 aaKnown RBP24.9■■□□□ 1.58
SPAST-204ENST00000621856 CACNB3P54284 484 aa24.9■■□□□ 1.58
SPAST-204ENST00000621856 KRT40Q6A162 431 aa24.9■■□□□ 1.58
SPAST-204ENST00000621856 RBM27Q9P2N5 1060 aaKnown RBP24.9■■□□□ 1.58
SPAST-204ENST00000621856 GABPAQ06546 454 aa24.89■■□□□ 1.58
SPAST-204ENST00000621856 PNMA1Q8ND90 353 aa24.89■■□□□ 1.58
SPAST-204ENST00000621856 RNF26Q9BY78 433 aaPredicted RBP24.89■■□□□ 1.58
SPAST-204ENST00000621856 SWAP70Q9UH65 585 aa24.89■■□□□ 1.58
SPAST-204ENST00000621856 SERPINB13Q9UIV8 391 aa24.89■■□□□ 1.58
SPAST-204ENST00000621856 HDAC9Q9UKV0 1011 aa24.89■■□□□ 1.58
SPAST-204ENST00000621856 ELP1O95163 1332 aa24.89■■□□□ 1.58
SPAST-204ENST00000621856 UBE2Q2LH0YL09 131 aa24.89■■□□□ 1.57
SPAST-204ENST00000621856 PLEKHA8P1O95397 391 aa24.89■■□□□ 1.57
SPAST-204ENST00000621856 TMTC3Q6ZXV5 915 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms