RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 LETM1O95202 739 aaPredicted RBP11.5□□□□□ -0.57
VTA1-205ENST00000620996 C15orf52Q6ZUT6 534 aaKnown RBP11.5□□□□□ -0.57
VTA1-205ENST00000620996 CTCFLQ8NI51 663 aaPredicted RBP11.5□□□□□ -0.57
VTA1-205ENST00000620996 PDGFDQ9GZP0 370 aaPredicted RBP11.5□□□□□ -0.57
VTA1-205ENST00000620996 COA1Q9GZY4 146 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 PLEKHA8P1O95397 391 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 FMNL1O95466 1100 aaPredicted RBP11.5□□□□□ -0.57
VTA1-205ENST00000620996 CLCN1P35523 988 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 NTRK3Q16288 839 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 MAP3K11Q16584 847 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 MYSM1Q5VVJ2 828 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 FSIP1Q8NA03 581 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 EYA3Q99504 573 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 KAT14Q9H8E8 782 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 CHD4Q14839 1912 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 USP17L3A6NCW0 530 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 USP17L4A6NCW7 530 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 IFNAR1P17181 557 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 MARCKSP29966 332 aaPredicted RBP11.5□□□□□ -0.57
VTA1-205ENST00000620996 PLCD1P51178 756 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 SEC23AQ15436 765 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 C12orf60Q5U649 245 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 USP17L1Q7RTZ2 530 aa11.5□□□□□ -0.57
VTA1-205ENST00000620996 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
VTA1-205ENST00000620996 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
VTA1-205ENST00000620996 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
VTA1-205ENST00000620996 V9GY48 417 aaPredicted RBP11.49□□□□□ -0.57
VTA1-205ENST00000620996 TIAM2Q8IVF5 1701 aa11.49□□□□□ -0.57
VTA1-205ENST00000620996 DEXIO95424 95 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 PCP11498 1178 aaKnown RBP11.48□□□□□ -0.57
VTA1-205ENST00000620996 PLCG2P16885 1265 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 SBK1Q52WX2 424 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 KIAA0825Q8IV33 1275 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 KCNQ5Q9NR82 932 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 VPS54Q9P1Q0 977 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
VTA1-205ENST00000620996 BTBD18B2RXH4 712 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 ORC4O43929 436 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 KINO60870 393 aaKnown RBP11.48□□□□□ -0.57
VTA1-205ENST00000620996 BAG6P46379 1132 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 DIS3L2Q8IYB7 885 aaKnown RBP11.48□□□□□ -0.57
VTA1-205ENST00000620996 DDX19AQ9NUU7 478 aaKnown RBP11.48□□□□□ -0.57
VTA1-205ENST00000620996 RCOR1Q9UKL0 485 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 FLT1P17948 1338 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 DUOX1Q9NRD9 1551 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 A0A1B0GVL5 298 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 SPTLC2O15270 562 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 ANO1Q5XXA6 986 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 CAMKK2Q96RR4 588 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
VTA1-205ENST00000620996 PCDHA7Q9UN72 937 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 CCDC88AQ3V6T2 1871 aa11.48□□□□□ -0.57
VTA1-205ENST00000620996 GPR75-ASB3A0A0A6YYF3 556 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 CCDC192P0DO97 292 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 XBP1P17861 261 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 PPP4CP60510 307 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 CERS5Q8N5B7 392 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 USP40Q9NVE5 1235 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 MYH2Q9UKX2 1941 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 C21orf2O43822 256 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 CALM1P0DP23 149 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 CALM2P0DP24 149 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 CALM3P0DP25 149 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 CCDC173Q0VFZ6 552 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 SASS6Q6UVJ0 657 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 GOLPH3LQ9H4A5 285 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 RTEL1Q9NZ71 1219 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 NR5A1Q13285 461 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 AOC3Q16853 763 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 ATL3Q6DD88 541 aa11.47□□□□□ -0.57
VTA1-205ENST00000620996 TMED8Q6PL24 325 aaPredicted RBP11.47□□□□□ -0.57
VTA1-205ENST00000620996 RBM28Q9NW13 759 aaKnown RBP11.47□□□□□ -0.57
VTA1-205ENST00000620996 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 PTMAP06454 111 aaKnown RBP11.46□□□□□ -0.57
VTA1-205ENST00000620996 CACNB3P54284 484 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 LINC00301Q8NCQ3 95 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 PNMA1Q8ND90 353 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 KCNG4Q8TDN1 519 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 MRPS27Q92552 414 aaKnown RBP11.46□□□□□ -0.57
VTA1-205ENST00000620996 ERCC4Q92889 916 aaPredicted RBP11.46□□□□□ -0.57
VTA1-205ENST00000620996 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.46□□□□□ -0.57
VTA1-205ENST00000620996 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 ZNF287Q9HBT7 754 aa11.46□□□□□ -0.57
VTA1-205ENST00000620996 RAD21O60216 631 aa11.46□□□□□ -0.58
VTA1-205ENST00000620996 DDAH1O94760 285 aa11.46□□□□□ -0.58
VTA1-205ENST00000620996 EIF6P56537 245 aaKnown RBP11.46□□□□□ -0.58
VTA1-205ENST00000620996 ATP2B2Q01814 1243 aa11.46□□□□□ -0.58
VTA1-205ENST00000620996 SDF4Q9BRK5 362 aa11.46□□□□□ -0.58
VTA1-205ENST00000620996 FAM205AQ6ZU69 1335 aa11.46□□□□□ -0.58
VTA1-205ENST00000620996 ANKRD31Q8N7Z5 1873 aa11.46□□□□□ -0.58
VTA1-205ENST00000620996 ECE2O60344 883 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 MMP1P03956 469 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 CDK8P49336 464 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 TCP10Q12799 353 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 TROAPQ12815 778 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 NBPF11Q86T75 865 aa11.45□□□□□ -0.58
VTA1-205ENST00000620996 ZSCAN29Q8IWY8 852 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms