RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 DNAJC18Q9H819 358 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 VAT1LQ9HCJ6 419 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 EPB41L4AQ9HCS5 686 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-210ENST00000618516 PI4KBQ9UBF8 816 aa5.5□□□□□ -1.53
SYCP1-210ENST00000618516 PASKQ96RG2 1323 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 GSG1L2A8MUP6 293 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 B4E1Z4 1266 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 FGAP02671 866 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 TSPY3P0CV98 308 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 TSPY8P0CW00 308 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 DCAF15Q66K64 600 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 IFNL3Q8IZI9 196 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 ZNF444Q8N0Y2 327 aaPredicted RBP5.49□□□□□ -1.53
SYCP1-210ENST00000618516 MYL10Q9BUA6 226 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 NACAP1Q9BZK3 213 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 CABP5Q9NP86 173 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 BIN2Q9UBW5 565 aaPredicted RBP5.49□□□□□ -1.53
SYCP1-210ENST00000618516 CLIP2Q9UDT6 1046 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 DDX49Q9Y6V7 483 aaKnown RBP5.49□□□□□ -1.53
SYCP1-210ENST00000618516 TRIOBPQ9H2D6 2365 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 CASP8AP2Q9UKL3 1982 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 UNC80Q8N2C7 3258 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 GOLGA8HP0CJ92 632 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 PLCG2P16885 1265 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 TFAP4Q01664 338 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 ABCB5Q2M3G0 1257 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 MCMDC2Q4G0Z9 681 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 CTR9Q6PD62 1173 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 FAM43AQ8N2R8 423 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 NKX2-3Q8TAU0 364 aa5.49□□□□□ -1.53
SYCP1-210ENST00000618516 GPHNQ9NQX3 736 aaPredicted RBP5.49□□□□□ -1.53
SYCP1-210ENST00000618516 TTC41PQ6P2S7 1318 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 hCG_1642624A0A1W2PR95 340 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 TCRBV5S4A2TA0A5A2 114 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 IGF2BP3O00425 579 aaKnown RBP eCLIP5.48□□□□□ -1.53
SYCP1-210ENST00000618516 HSPD1P10809 573 aaKnown RBP5.48□□□□□ -1.53
SYCP1-210ENST00000618516 FOSBP53539 338 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 TTC6Q86TZ1 520 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 CMTR1Q8N1G2 835 aaKnown RBP5.48□□□□□ -1.53
SYCP1-210ENST00000618516 ANKRD13CQ8N6S4 541 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 UPF3BQ9BZI7 483 aaKnown RBP5.48□□□□□ -1.53
SYCP1-210ENST00000618516 FBXO28Q9NVF7 368 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 TLL2Q9Y6L7 1015 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 MYH2Q9UKX2 1941 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 MYO9BQ13459 2157 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 GAKO14976 1311 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 FRMPD2Q68DX3 1309 aaPredicted RBP5.48□□□□□ -1.53
SYCP1-210ENST00000618516 MCCP23508 829 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 SLC16A2P36021 539 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 CDK8P49336 464 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 CHMP4BP1P59074 171 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 ICA1Q05084 483 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 CCDC96Q2M329 555 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 TREML2Q5T2D2 321 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 RASAL3Q86YV0 1011 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 DNAJC5GQ8N7S2 189 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 NUP133Q8WUM0 1156 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 ARHGAP39Q9C0H5 1083 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 SNCAIPQ9Y6H5 919 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 ZNF213O14771 459 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 NOGQ13253 232 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 ZBED3Q96IU2 234 aaPredicted RBP5.48□□□□□ -1.53
SYCP1-210ENST00000618516 PTPN18Q99952 460 aa5.48□□□□□ -1.53
SYCP1-210ENST00000618516 PTPRAP18433 802 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 CHMLP26374 656 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 IRX3P78415 501 aaPredicted RBP5.47□□□□□ -1.53
SYCP1-210ENST00000618516 PPARAQ07869 468 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 CRHR2Q13324 411 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 UBE3CQ15386 1083 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 LRRFIP1Q32MZ4 808 aaKnown RBP5.47□□□□□ -1.53
SYCP1-210ENST00000618516 SPRYD7Q5W111 196 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 ANO1Q5XXA6 986 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 HOMER1Q86YM7 354 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.47□□□□□ -1.53
SYCP1-210ENST00000618516 BRI3BPQ8WY22 251 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 KIFC2Q96AC6 838 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 UIMC1Q96RL1 719 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 GPCPD1Q9NPB8 672 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 SUGT1Q9Y2Z0 365 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 LRRC37AA6NMS7 1700 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 COL6A3P12111 3177 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 CCDC171Q6TFL3 1326 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 SALL1Q9NSC2 1324 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 CCDC85CA6NKD9 419 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 PDHXO00330 501 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 FLOT1O75955 427 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 FMNL1O95466 1100 aaPredicted RBP5.47□□□□□ -1.53
SYCP1-210ENST00000618516 CAP2P40123 477 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 HDLBPQ00341 1268 aaKnown RBP5.47□□□□□ -1.53
SYCP1-210ENST00000618516 STK3Q13188 491 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 ZMYM1Q5SVZ6 1142 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 TBC1D10CQ8IV04 446 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 WNK4Q96J92 1243 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 ZFP91Q96JP5 570 aaPredicted RBP5.47□□□□□ -1.53
SYCP1-210ENST00000618516 ZBTB21Q9ULJ3 1066 aa5.47□□□□□ -1.53
SYCP1-210ENST00000618516 CTDP1Q9Y5B0 961 aaPredicted RBP5.47□□□□□ -1.53
SYCP1-210ENST00000618516 A0A1W2PRG0 241 aa5.46□□□□□ -1.53
SYCP1-210ENST00000618516 PATL2C9JE40 543 aaKnown RBP5.46□□□□□ -1.53
SYCP1-210ENST00000618516 BTBD19C9JJ37 291 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms