RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 APBA3O96018 575 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 PLCG2P16885 1265 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 RESTQ13127 1097 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 FANCBQ8NB91 859 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 TAF4BQ92750 862 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 LUC7LQ9NQ29 371 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 MTX1Q13505 466 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 UBE3CQ15386 1083 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 ADALQ6DHV7 355 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 WDR66Q8TBY9 1149 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 XPO4Q9C0E2 1151 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 PYCARDQ9ULZ3 195 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 TRIM37O94972 964 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 FGFR1OPO95684 399 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 RAD51AP2Q09MP3 1159 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 MFSD14BQ5SR56 506 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 SYCP3Q8IZU3 236 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 DYNLL2Q96FJ2 89 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 UBR1Q8IWV7 1749 aa10.11□□□□□ -0.79
PDLIM5-222ENST00000615540 USP8P40818 1118 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 MEGF6O75095 1541 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 DYMQ7RTS9 669 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 RASGRP4Q8TDF6 673 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 GOLPH3LQ9H4A5 285 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 ZNF609O15014 1411 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 SOS2Q07890 1332 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 TBCAO75347 108 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 TBC1D9BQ66K14 1250 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 PPP1R9BQ96SB3 815 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 EYA3Q99504 573 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 EHMT1Q9H9B1 1298 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 GUCA1BQ9UMX6 200 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 FMNL1O95466 1100 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 WDR78Q5VTH9 848 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 IQUBQ8NA54 791 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 BAG1Q99933 345 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 PDE4DQ08499 809 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 CCDC174Q6PII3 467 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 TAB2Q9NYJ8 693 aa10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-222ENST00000615540 PSMA7O14818 248 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 ADKP55263 362 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 ZNF569Q5MCW4 686 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 IQCEQ6IPM2 695 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 APOA5Q6Q788 366 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 FAM196AQ6ZSG2 479 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 STOX1Q6ZVD7 989 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 ZSWIM5Q9P217 1185 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 PGBD1Q96JS3 809 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 CEMIPQ8WUJ3 1361 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 USP17L8P0C7I0 530 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 ARID4AP29374 1257 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 MECOMQ03112 1051 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 LEKR1Q6ZMV7 388 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 IGSF22Q8N9C0 903 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 CYP2D6P10635 497 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 GNA11P29992 359 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 TXLNBQ8N3L3 684 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 NELFBQ8WX92 580 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 CSRNP2Q9H175 543 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 HDAC9Q9UKV0 1011 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 SPDYE3A6NKU9 549 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 DDX39AO00148 427 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 NMT2O60551 498 aa10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-222ENST00000615540 USO1O60763 962 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 NR5A1Q13285 461 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 INF2Q27J81 1249 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 TTF2Q9UNY4 1162 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 FCHSD1Q86WN1 690 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 CPDO75976 1380 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 AKR1B15C9JRZ8 316 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 SP4Q02446 784 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 COL15A1P39059 1388 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 ERVV-1B6SEH8 477 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 EIF3JO75822 258 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 CCDC175P0C221 793 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 TERF1P54274 439 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 SV2BQ7L1I2 683 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 SMYD4Q8IYR2 804 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 MACROD2A1Z1Q3 448 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 NOP2P46087 812 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 ADCY7P51828 1080 aa10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 KIF23Q02241 960 aaPredicted RBP10.08□□□□□ -0.8
PDLIM5-222ENST00000615540 SMCO2A6NFE2 343 aa10.07□□□□□ -0.8
PDLIM5-222ENST00000615540 TMCO5BA8MYB1 307 aa10.07□□□□□ -0.8
PDLIM5-222ENST00000615540 TECP42680 631 aa10.07□□□□□ -0.8
PDLIM5-222ENST00000615540 NCAPH2Q6IBW4 605 aa10.07□□□□□ -0.8
PDLIM5-222ENST00000615540 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms