RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MCATQ8IVS2 390 aaKnown RBP8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 FBXO27Q8NI29 283 aa8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 PODXL2Q9NZ53 605 aa8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 ZC3H7BQ9UGR2 993 aaKnown RBP8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 POLR3KQ9Y2Y1 108 aaPredicted RBP8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 CORINQ9Y5Q5 1042 aa8.54□□□□□ -1.04
SCAMP1-205ENST00000614488 SLITRK5O94991 958 aa8.53□□□□□ -1.04
SCAMP1-205ENST00000614488 PLCG1P19174 1290 aa8.53□□□□□ -1.04
SCAMP1-205ENST00000614488 KIAA0825Q8IV33 1275 aa8.53□□□□□ -1.04
SCAMP1-205ENST00000614488 ACSF2Q96CM8 615 aaPredicted RBP8.53□□□□□ -1.04
SCAMP1-205ENST00000614488 MIPEPQ99797 713 aa8.53□□□□□ -1.04
SCAMP1-205ENST00000614488 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
SCAMP1-205ENST00000614488 EOMESO95936 686 aa8.52□□□□□ -1.05
SCAMP1-205ENST00000614488 ZNF746Q6NUN9 644 aaPredicted RBP8.52□□□□□ -1.05
SCAMP1-205ENST00000614488 VSIG10LQ86VR7 867 aa8.52□□□□□ -1.05
SCAMP1-205ENST00000614488 NT5C1AQ9BXI3 368 aa8.52□□□□□ -1.05
SCAMP1-205ENST00000614488 MAPK8IP1Q9UQF2 711 aa8.52□□□□□ -1.05
SCAMP1-205ENST00000614488 TLR3O15455 904 aaKnown RBP8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 HTR3BO95264 441 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 CRKP46108 304 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 OXCT1P55809 520 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 LETMD1Q6P1Q0 360 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 FAM181AQ8N9Y4 354 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 NETO1Q8TDF5 533 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 HEXIM2Q96MH2 286 aaKnown RBP8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 SPON2Q9BUD6 331 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 PRDM5Q9NQX1 630 aaPredicted RBP8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 REV1Q9UBZ9 1251 aa8.51□□□□□ -1.05
SCAMP1-205ENST00000614488 CEACAM5P06731 702 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 YARSP54577 528 aaKnown RBP8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 APOBRQ0VD83 1088 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 ZNF394Q53GI3 561 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 ARHGAP27Q6ZUM4 889 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 C22orf34Q6ZV56 151 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 NBPF11Q86T75 865 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 METTL16Q86W50 562 aaKnown RBP8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 MISP3Q96FF7 219 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 COX4I2Q96KJ9 171 aa8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 DDX41Q9UJV9 622 aaKnown RBP8.5□□□□□ -1.05
SCAMP1-205ENST00000614488 GRIN3BO60391 1043 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 ATE1O95260 518 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 IFI16Q16666 785 aaKnown RBP8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 SLFN12Q8IYM2 578 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 FAM13CQ8NE31 585 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 DPH2Q9BQC3 489 aaPredicted RBP8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 BRMS1Q9HCU9 246 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 UBP1Q9NZI7 540 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 CCDC39Q9UFE4 941 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 PCDHGB7Q9Y5F8 929 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 U3KQE9 123 aa8.49□□□□□ -1.05
SCAMP1-205ENST00000614488 WNT11O96014 354 aa8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 HDLBPQ00341 1268 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 MLECQ14165 292 aa8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 SLITRK4Q8IW52 837 aa8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 STK11IPQ8N1F8 1099 aa8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 REXO1Q8N1G1 1221 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 PLD6Q8N2A8 252 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 XAGE3Q8WTP9 111 aa8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 EAF1Q96JC9 268 aaPredicted RBP8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 TNKS2Q9H2K2 1166 aa8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 TPX2Q9ULW0 747 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 ANGEL1Q9UNK9 670 aaKnown RBP8.48□□□□□ -1.05
SCAMP1-205ENST00000614488 GNAT3A8MTJ3 354 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 CYP7A1P22680 504 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 SEZ6Q53EL9 994 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 SFRP5Q5T4F7 317 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 NKD1Q969G9 470 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 EHMT1Q9H9B1 1298 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 PCDHB14Q9Y5E9 798 aa8.47□□□□□ -1.05
SCAMP1-205ENST00000614488 TMEM265A0A087WTH1 108 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 ADAMTS4O75173 837 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 ZNF865P0CJ78 1059 aaPredicted RBP8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 ETV3P41162 512 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 ZNF165P49910 485 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 DNAJB8Q8NHS0 232 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 RIN3Q8TB24 985 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 FBXL18Q96ME1 805 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 PLAGL2Q9UPG8 496 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 SNX11Q9Y5W9 270 aa8.46□□□□□ -1.06
SCAMP1-205ENST00000614488 ITIH2P19823 946 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 CLCN7P51798 805 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 NT5DC4Q86YG4 428 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 SPACA3Q8IXA5 215 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 KLHL3Q9UH77 587 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 VAV3Q9UKW4 847 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 CEP131Q9UPN4 1083 aa8.45□□□□□ -1.06
SCAMP1-205ENST00000614488 UPK3BL1B0FP48 263 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 UPK3BL2E5RIL1 263 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 DNAJA2O60884 412 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 KIR3DL1P43629 444 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 GP2P55259 537 aaKnown RBP8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 PRKCQQ04759 706 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 NKPD1Q17RQ9 610 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 CDH24Q86UP0 819 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 MFSD4AQ8N468 514 aa8.44□□□□□ -1.06
SCAMP1-205ENST00000614488 PPP1R13LQ8WUF5 828 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms