RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MYCBPQ99417 103 aaPredicted RBP16.41■□□□□ 0.22
VPS36-207ENST00000611132 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 VAT1LQ9HCJ6 419 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 EPN1Q9Y6I3 576 aaPredicted RBP16.41■□□□□ 0.22
VPS36-207ENST00000611132 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 ENOX1Q8TC92 643 aaKnown RBP16.41■□□□□ 0.22
VPS36-207ENST00000611132 CAPS2Q9BXY5 557 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 ABCC3O15438 1527 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 CYP2C19P33261 490 aa16.41■□□□□ 0.22
VPS36-207ENST00000611132 ALDH8A1Q9H2A2 487 aaPredicted RBP16.41■□□□□ 0.22
VPS36-207ENST00000611132 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 RNF40O75150 1001 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 SLFN14P0C7P3 912 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 EFCAB13Q8IY85 973 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 FAM89AQ96GI7 184 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 PSMB7Q99436 277 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
VPS36-207ENST00000611132 BLZF1Q9H2G9 400 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 MAGEA1P43355 309 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 PAK2Q13177 524 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 KCNJ18B7U540 433 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 KCNJ12Q14500 433 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 CASP8Q14790 479 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 E4F1Q66K89 784 aaPredicted RBP16.4■□□□□ 0.22
VPS36-207ENST00000611132 PIK3AP1Q6ZUJ8 805 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 FUCA2Q9BTY2 467 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 IL25Q9H293 177 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 JRKLQ9Y4A0 524 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 CAPN7Q9Y6W3 813 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 METP08581 1390 aa16.4■□□□□ 0.22
VPS36-207ENST00000611132 CCT5P48643 541 aa16.39■□□□□ 0.22
VPS36-207ENST00000611132 ARMCX5Q6P1M9 558 aa16.39■□□□□ 0.22
VPS36-207ENST00000611132 LMBR1Q8WVP7 490 aa16.39■□□□□ 0.22
VPS36-207ENST00000611132 ARMT1Q9H993 441 aa16.39■□□□□ 0.22
VPS36-207ENST00000611132 A0A1B0GUA9 196 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 KCNA6P17658 529 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 PDE4DQ08499 809 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 RBL2Q08999 1139 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 ZCRB1Q8TBF4 217 aaKnown RBP16.39■□□□□ 0.21
VPS36-207ENST00000611132 ABCB6Q9NP58 842 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 MAST3O60307 1309 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 SOWAHDA6NJG2 315 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 NOX5Q96PH1 765 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 PRR36Q9H6K5 1346 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 ZBTB22O15209 634 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 MORC3Q14149 939 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 SPTY2D1Q68D10 685 aaPredicted RBP16.39■□□□□ 0.21
VPS36-207ENST00000611132 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
VPS36-207ENST00000611132 CTDP1Q9Y5B0 961 aaPredicted RBP16.39■□□□□ 0.21
VPS36-207ENST00000611132 GOLGA8KD6RF30 607 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 ZNF76P36508 570 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 KCNJ6P48051 423 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 ZNF532Q9HCE3 1301 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 A0A087WUV0 522 aaPredicted RBP16.38■□□□□ 0.21
VPS36-207ENST00000611132 TADA3O75528 432 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 CABS1Q96KC9 395 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 SELENOSQ9BQE4 189 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 MAN1B1Q9UKM7 699 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 IRS4O14654 1257 aaPredicted RBP16.38■□□□□ 0.21
VPS36-207ENST00000611132 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 UBLCP1Q8WVY7 318 aaPredicted RBP16.38■□□□□ 0.21
VPS36-207ENST00000611132 USP6P35125 1406 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 SLC4A8Q2Y0W8 1093 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 PANX2Q96RD6 677 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 SAMSN1Q9NSI8 373 aaKnown RBP16.38■□□□□ 0.21
VPS36-207ENST00000611132 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
VPS36-207ENST00000611132 TLDC2A0PJX2 215 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 CFAP221Q4G0U5 840 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 AKNAD1Q5T1N1 836 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 NBPF14Q5TI25 921 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 NYAP1Q6ZVC0 841 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 RSRC1Q96IZ7 334 aaKnown RBP16.37■□□□□ 0.21
VPS36-207ENST00000611132 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
VPS36-207ENST00000611132 NAPAP54920 295 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 LRRC45Q96CN5 670 aa16.37■□□□□ 0.21
VPS36-207ENST00000611132 ADGRB3O60242 1522 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 AP5Z1O43299 807 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 RUFY4Q6ZNE9 571 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 CERS3Q8IU89 383 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 GSDMAQ96QA5 445 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 CEP152O94986 1710 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
VPS36-207ENST00000611132 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
VPS36-207ENST00000611132 ATP6V1AP38606 617 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 MAGEA9P43362 315 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 NAA25Q14CX7 972 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 TSGA10IPQ3SY00 556 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 SPATS2Q86XZ4 545 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms