RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 GABPB1Q06547 395 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 SRP68Q9UHB9 627 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 BCS1LQ9Y276 419 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 LDHCP07864 332 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 CLCN6P51797 869 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 SPATA5Q8NB90 893 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 ZCCHC17Q9NP64 241 aaKnown RBP11.73□□□□□ -0.53
CTCFL-216ENST00000608263 POLR3EQ9NVU0 708 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 MYO1BO43795 1136 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 KRT9P35527 623 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 CACNA2D4Q7Z3S7 1137 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
CTCFL-216ENST00000608263 MACROD2A1Z1Q3 448 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 NBPF26B4DH59 902 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
CTCFL-216ENST00000608263 TMTC2Q8N394 836 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 NBPF15Q8N660 670 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZSWIM5Q9P217 1185 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 UBE2Q2LH0YL09 131 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 DEXIO95424 95 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZNF76P36508 570 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ARID5AQ03989 594 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 PDE8AO60658 829 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CDC25BP30305 580 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 PDIA6Q15084 440 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CTR9Q6PD62 1173 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CYB5R4Q7L1T6 521 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 MLKLQ8NB16 471 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 GBP3Q9H0R5 595 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
CTCFL-216ENST00000608263 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
CTCFL-216ENST00000608263 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 AKR1B10O60218 316 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 MCAMP43121 646 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 SMC1AQ14683 1233 aaKnown RBP11.71□□□□□ -0.53
CTCFL-216ENST00000608263 PUM3Q15397 648 aaKnown RBP11.71□□□□□ -0.53
CTCFL-216ENST00000608263 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 FAM107BQ9H098 131 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 PIH1D3Q9NQM4 214 aaKnown RBP11.71□□□□□ -0.53
CTCFL-216ENST00000608263 PCDHB6Q9Y5E3 794 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 ZMYM6O95789 1325 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 TCHHQ07283 1943 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 H7C1W4 665 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 CDC27P30260 824 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 MMRN2Q9H8L6 949 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
CTCFL-216ENST00000608263 FDPSP14324 419 aaKnown RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 GYG1P46976 350 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 ASIC1P78348 528 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 IQUBQ8NA54 791 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 CSRNP2Q9H175 543 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 SENP2Q9HC62 589 aa11.71□□□□□ -0.54
CTCFL-216ENST00000608263 SAP30BPQ9UHR5 308 aaKnown RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.54
CTCFL-216ENST00000608263 CCZ1BP86790 482 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CCZ1P86791 482 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 PARP10Q53GL7 1025 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 TCP11L1Q9NUJ3 509 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ADAMTS13Q76LX8 1427 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 E4F1Q66K89 784 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 SARM1Q6SZW1 724 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ZNF804AQ7Z570 1209 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 LPIN2Q92539 896 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 UBA5Q9GZZ9 404 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ZNF287Q9HBT7 754 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 DLC1Q96QB1 1528 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 H0YIN7 160 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 ZBTB22O15209 634 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 CTSWP56202 376 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 EIF6P56537 245 aaKnown RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 RNASE9P60153 205 aaKnown RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 HLFQ16534 295 aa11.7□□□□□ -0.54
CTCFL-216ENST00000608263 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-216ENST00000608263 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms