RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ANGEL1Q9UNK9 670 aaKnown RBP21.86■■□□□ 1.09
SSBP4-212ENST00000601919 TBC1D12O60347 775 aa21.85■■□□□ 1.09
SSBP4-212ENST00000601919 CD2BP2O95400 341 aaKnown RBP21.85■■□□□ 1.09
SSBP4-212ENST00000601919 TFAP4Q01664 338 aa21.85■■□□□ 1.09
SSBP4-212ENST00000601919 LRRC2Q9BYS8 371 aa21.85■■□□□ 1.09
SSBP4-212ENST00000601919 TAF1DQ9H5J8 278 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-212ENST00000601919 SH2B1Q9NRF2 756 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-212ENST00000601919 ASTN2O75129 1339 aaPredicted RBP21.84■■□□□ 1.09
SSBP4-212ENST00000601919 LIFRP42702 1097 aa21.84■■□□□ 1.09
SSBP4-212ENST00000601919 COL9A3Q14050 684 aaPredicted RBP21.84■■□□□ 1.09
SSBP4-212ENST00000601919 TOB2Q14106 344 aaPredicted RBP21.84■■□□□ 1.09
SSBP4-212ENST00000601919 PPP4R3BQ5MIZ7 849 aa21.84■■□□□ 1.09
SSBP4-212ENST00000601919 BRF1Q92994 677 aa21.84■■□□□ 1.09
SSBP4-212ENST00000601919 ZSCAN10Q96SZ4 725 aaPredicted RBP21.84■■□□□ 1.09
SSBP4-212ENST00000601919 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.84■■□□□ 1.09
SSBP4-212ENST00000601919 TCP11L1Q9NUJ3 509 aa21.84■■□□□ 1.09
SSBP4-212ENST00000601919 POLR2AP24928 1970 aaKnown RBP21.83■■□□□ 1.09
SSBP4-212ENST00000601919 SH2B2O14492 632 aaPredicted RBP21.83■■□□□ 1.09
SSBP4-212ENST00000601919 SHMT1P34896 483 aa21.83■■□□□ 1.09
SSBP4-212ENST00000601919 WTAPQ15007 396 aa21.83■■□□□ 1.09
SSBP4-212ENST00000601919 FAM47AQ5JRC9 791 aa21.83■■□□□ 1.09
SSBP4-212ENST00000601919 NOL8Q76FK4 1167 aaKnown RBP21.83■■□□□ 1.09
SSBP4-212ENST00000601919 SULF1Q8IWU6 871 aa21.83■■□□□ 1.09
SSBP4-212ENST00000601919 NEDD1Q8NHV4 660 aa21.83■■□□□ 1.09
SSBP4-212ENST00000601919 IGDCC4Q8TDY8 1250 aa21.83■■□□□ 1.09
SSBP4-212ENST00000601919 CHMP4CQ96CF2 233 aa21.83■■□□□ 1.09
SSBP4-212ENST00000601919 VEGFAP15692 232 aaPredicted RBP21.82■■□□□ 1.08
SSBP4-212ENST00000601919 CERKLQ49MI3 558 aaPredicted RBP21.82■■□□□ 1.08
SSBP4-212ENST00000601919 DCAF15Q66K64 600 aa21.82■■□□□ 1.08
SSBP4-212ENST00000601919 TATDN1Q6P1N9 297 aa21.82■■□□□ 1.08
SSBP4-212ENST00000601919 NFXL1Q6ZNB6 911 aa21.82■■□□□ 1.08
SSBP4-212ENST00000601919 PGAP2Q9UHJ9 254 aa21.82■■□□□ 1.08
SSBP4-212ENST00000601919 PLIN4Q96Q06 1357 aa21.82■■□□□ 1.08
SSBP4-212ENST00000601919 TNKSO95271 1327 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 CCDC69A6NI79 296 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 HSP90AA1P07900 732 aaKnown RBP21.81■■□□□ 1.08
SSBP4-212ENST00000601919 SUPT20HL1Q3ZLR7 823 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 SYNE3Q6ZMZ3 975 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 TMX3Q96JJ7 454 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 TEPSINQ96N21 525 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 ZKSCAN3Q9BRR0 538 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 LY9Q9HBG7 655 aa21.81■■□□□ 1.08
SSBP4-212ENST00000601919 EVCP57679 992 aa21.8■■□□□ 1.08
SSBP4-212ENST00000601919 MAP3K10Q02779 954 aa21.8■■□□□ 1.08
SSBP4-212ENST00000601919 EAPPQ56P03 285 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-212ENST00000601919 IFIT1BQ5T764 474 aaKnown RBP21.8■■□□□ 1.08
SSBP4-212ENST00000601919 SGMS1Q86VZ5 419 aa21.8■■□□□ 1.08
SSBP4-212ENST00000601919 DGKHQ86XP1 1220 aa21.8■■□□□ 1.08
SSBP4-212ENST00000601919 NKX2-3Q8TAU0 364 aa21.8■■□□□ 1.08
SSBP4-212ENST00000601919 ZNF274Q96GC6 653 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-212ENST00000601919 DNAJC18Q9H819 358 aa21.8■■□□□ 1.08
SSBP4-212ENST00000601919 TPCN1Q9ULQ1 816 aa21.8■■□□□ 1.08
SSBP4-212ENST00000601919 POTECB2RU33 542 aa21.79■■□□□ 1.08
SSBP4-212ENST00000601919 MPHOSPH10O00566 681 aaKnown RBP21.79■■□□□ 1.08
SSBP4-212ENST00000601919 APOBRQ0VD83 1088 aa21.79■■□□□ 1.08
SSBP4-212ENST00000601919 ENAHQ8N8S7 591 aaPredicted RBP21.79■■□□□ 1.08
SSBP4-212ENST00000601919 CABP5Q9NP86 173 aa21.79■■□□□ 1.08
SSBP4-212ENST00000601919 NAP1L2Q9ULW6 460 aaPredicted RBP21.79■■□□□ 1.08
SSBP4-212ENST00000601919 KLF18A0A0U1RQI7 1052 aa21.78■■□□□ 1.08
SSBP4-212ENST00000601919 AKR1B1P15121 316 aa21.78■■□□□ 1.08
SSBP4-212ENST00000601919 SEC23AQ15436 765 aa21.78■■□□□ 1.08
SSBP4-212ENST00000601919 KRT26Q7Z3Y9 468 aa21.78■■□□□ 1.08
SSBP4-212ENST00000601919 ANKS1AQ92625 1134 aa21.78■■□□□ 1.08
SSBP4-212ENST00000601919 LARP6Q9BRS8 491 aaKnown RBP21.78■■□□□ 1.08
SSBP4-212ENST00000601919 SLKQ9H2G2 1235 aaPredicted RBP21.78■■□□□ 1.08
SSBP4-212ENST00000601919 SCAF8Q9UPN6 1271 aaKnown RBP21.78■■□□□ 1.08
SSBP4-212ENST00000601919 SLC12A7Q9Y666 1083 aa21.78■■□□□ 1.08
SSBP4-212ENST00000601919 FAM196BA6NMK8 535 aa21.77■■□□□ 1.08
SSBP4-212ENST00000601919 RCAN1P53805 252 aa21.77■■□□□ 1.08
SSBP4-212ENST00000601919 ABCB5Q2M3G0 1257 aa21.77■■□□□ 1.08
SSBP4-212ENST00000601919 TMEM179Q6ZVK1 233 aa21.77■■□□□ 1.08
SSBP4-212ENST00000601919 MIGA2Q7L4E1 593 aa21.77■■□□□ 1.08
SSBP4-212ENST00000601919 CATIPQ7Z7H3 387 aa21.77■■□□□ 1.08
SSBP4-212ENST00000601919 GPHNQ9NQX3 736 aaPredicted RBP21.77■■□□□ 1.08
SSBP4-212ENST00000601919 IL17RBQ9NRM6 502 aa21.77■■□□□ 1.08
SSBP4-212ENST00000601919 GREB1LQ9C091 1923 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-212ENST00000601919 GOLGA8BA8MQT2 603 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 ME3Q16798 604 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 NBPF12Q5TAG4 269 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-212ENST00000601919 CDAN1Q8IWY9 1227 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 ZNF341Q9BYN7 854 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 KAT14Q9H8E8 782 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 KANSL2Q9H9L4 492 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 RRAGCQ9HB90 399 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 GINM1Q9NU53 330 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 CLEC11AQ9Y240 323 aa21.76■■□□□ 1.07
SSBP4-212ENST00000601919 UTRNP46939 3433 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 ZBTB43O43298 467 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 DHX16O60231 1041 aaKnown RBP21.75■■□□□ 1.07
SSBP4-212ENST00000601919 NMT2O60551 498 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 PFKFB2O60825 505 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 CALM1P0DP23 149 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 CALM2P0DP24 149 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 CALM3P0DP25 149 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 PDIA3P30101 505 aaKnown RBP21.75■■□□□ 1.07
SSBP4-212ENST00000601919 NF2P35240 595 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 CUL4AQ13619 759 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 APOA5Q6Q788 366 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 CDC37L1Q7L3B6 337 aa21.75■■□□□ 1.07
SSBP4-212ENST00000601919 CEP95Q96GE4 821 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms