RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 TSPY3P0CV98 308 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 TSPY8P0CW00 308 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 RASA1P20936 1047 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 MCM5P33992 734 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 CAP2P40123 477 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 TFAP4Q01664 338 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 TTLL12Q14166 644 aaPredicted RBP12.6□□□□□ -0.39
SMAD4-214ENST00000592186 MAP3K11Q16584 847 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 ABCB5Q2M3G0 1257 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
SMAD4-214ENST00000592186 IQCA1Q86XH1 822 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
SMAD4-214ENST00000592186 TSPY2A6NKD2 308 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 PRDM1O75626 825 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 CELF2O95319 508 aaKnown RBP12.59□□□□□ -0.39
SMAD4-214ENST00000592186 ASNSP08243 561 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 SART3Q15020 963 aaKnown RBP12.59□□□□□ -0.39
SMAD4-214ENST00000592186 BLOC1S2Q6QNY1 142 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 DHX32Q7L7V1 743 aaKnown RBP12.59□□□□□ -0.39
SMAD4-214ENST00000592186 ANKRD13AQ8IZ07 590 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 NEDD1Q8NHV4 660 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
SMAD4-214ENST00000592186 TTC14Q96N46 770 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 DNAJC18Q9H819 358 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 KANSL2Q9H9L4 492 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 INCENPQ9NQS7 918 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 CSADQ9Y600 493 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 CYP46A1Q9Y6A2 500 aa12.59□□□□□ -0.39
SMAD4-214ENST00000592186 WDR19Q8NEZ3 1342 aa12.58□□□□□ -0.39
SMAD4-214ENST00000592186 B4E1Z4 1266 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 SMIM22K7EJ46 135 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 KDM4AO75164 1064 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 EVX2Q03828 476 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 DLK2Q6UY11 383 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 SCYL3Q8IZE3 742 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 TMTC2Q8N394 836 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 SLC44A5Q8NCS7 719 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMAD4-214ENST00000592186 WRNIP1Q96S55 665 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 ZNF408Q9H9D4 720 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 GBA2Q9HCG7 927 aaPredicted RBP12.58□□□□□ -0.4
SMAD4-214ENST00000592186 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 ANGEL1Q9UNK9 670 aaKnown RBP12.58□□□□□ -0.4
SMAD4-214ENST00000592186 NAV1Q8NEY1 1877 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 CDK5RAP2Q96SN8 1893 aa12.58□□□□□ -0.4
SMAD4-214ENST00000592186 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 MYH1P12882 1939 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
SMAD4-214ENST00000592186 ERICH2A1L162 156 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 FAM196BA6NMK8 535 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 MPHOSPH10O00566 681 aaKnown RBP12.57□□□□□ -0.4
SMAD4-214ENST00000592186 CASTP20810 708 aaKnown RBP12.57□□□□□ -0.4
SMAD4-214ENST00000592186 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 NOL9Q5SY16 702 aaKnown RBP12.57□□□□□ -0.4
SMAD4-214ENST00000592186 LDLRAD1Q5T700 205 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 CST9Q5W186 159 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 STOX1Q6ZVD7 989 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 MB21D2Q8IYB1 491 aaPredicted RBP12.57□□□□□ -0.4
SMAD4-214ENST00000592186 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 TAF6LQ9Y6J9 622 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 NEDD4P46934 1319 aa12.57□□□□□ -0.4
SMAD4-214ENST00000592186 GH2P01242 217 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 AKR1B1P15121 316 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 EXOSC10Q01780 885 aaKnown RBP12.56□□□□□ -0.4
SMAD4-214ENST00000592186 PRKG1Q13976 671 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 RABEP1Q15276 862 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 FBXL16Q8N461 479 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-214ENST00000592186 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-214ENST00000592186 SYNPO2Q9UMS6 1093 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
SMAD4-214ENST00000592186 BAZ2AQ9UIF9 1905 aaKnown RBP12.56□□□□□ -0.4
SMAD4-214ENST00000592186 SSC5DA1L4H1 1573 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 TMEM88BA6NKF7 163 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 UBE2Q2LH0YL09 131 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
SMAD4-214ENST00000592186 PRC1O43663 620 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 SLURP2P0DP57 97 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 RPS6KB1P23443 525 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 INPP5BP32019 993 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 FGD1P98174 961 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 RAB3GAP1Q15042 981 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 ANKRD1Q15327 319 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
SMAD4-214ENST00000592186 ANKS1AQ92625 1134 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 ZKSCAN4Q969J2 545 aaPredicted RBP12.55□□□□□ -0.4
SMAD4-214ENST00000592186 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
SMAD4-214ENST00000592186 SH2D4AQ9H788 454 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms