RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 BRD2P25440 801 aaKnown RBP9.98□□□□□ -0.81
VMP1-213ENST00000591877 PRKAR2BP31323 418 aa9.98□□□□□ -0.81
VMP1-213ENST00000591877 DSC3Q14574 896 aa9.98□□□□□ -0.81
VMP1-213ENST00000591877 ZCCHC2Q9C0B9 1178 aaKnown RBP9.98□□□□□ -0.81
VMP1-213ENST00000591877 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
VMP1-213ENST00000591877 ZFP64Q9NPA5 681 aa9.98□□□□□ -0.81
VMP1-213ENST00000591877 DLG5Q8TDM6 1919 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 GNAT3A8MTJ3 354 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 CYP19A1P11511 503 aaPredicted RBP9.97□□□□□ -0.81
VMP1-213ENST00000591877 MRPL58Q14197 206 aaKnown RBP9.97□□□□□ -0.81
VMP1-213ENST00000591877 RTN1Q16799 776 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 NKAPLQ5M9Q1 402 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 TBCELQ5QJ74 424 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 FCHSD1Q86WN1 690 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 NLGN1Q8N2Q7 840 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 CFAP53Q96M91 514 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 SRP68Q9UHB9 627 aaKnown RBP9.97□□□□□ -0.81
VMP1-213ENST00000591877 BRCA1P38398 1863 aaKnown RBP9.97□□□□□ -0.81
VMP1-213ENST00000591877 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
VMP1-213ENST00000591877 IGHA2P01877 340 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 SPATA31C1P0DKV0 1188 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 RFC4P35249 363 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 USP5P45974 858 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 TAGLNQ01995 201 aaKnown RBP9.96□□□□□ -0.82
VMP1-213ENST00000591877 ARTNQ5T4W7 220 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 TPSG1Q9NRR2 321 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 CCDC87Q9NVE4 849 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 LRFN2Q9ULH4 789 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 PCDHGC4Q9Y5F7 938 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 USP42Q9H9J4 1324 aaKnown RBP9.96□□□□□ -0.82
VMP1-213ENST00000591877 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 PXDNLA1KZ92 1463 aa9.96□□□□□ -0.82
VMP1-213ENST00000591877 AFDNP55196 1824 aaKnown RBP9.96□□□□□ -0.82
VMP1-213ENST00000591877 PRPF40AO75400 957 aaKnown RBP9.95□□□□□ -0.82
VMP1-213ENST00000591877 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
VMP1-213ENST00000591877 ADH6P28332 368 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.821e-15■■■□□ 17.4
VMP1-213ENST00000591877 PLCB3Q01970 1234 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 FIGNL1Q6PIW4 674 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 ZNF295-AS1Q8N0V1 137 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 RHBDD1Q8TEB9 315 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 HCN2Q9UL51 889 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 WWC3Q9ULE0 1092 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 ZBTB1Q9Y2K1 713 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 USP3Q9Y6I4 520 aa9.95□□□□□ -0.82
VMP1-213ENST00000591877 SOS1Q07889 1333 aaPredicted RBP9.95□□□□□ -0.82
VMP1-213ENST00000591877 DCDC2BA2VCK2 349 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 KCNQ3O43525 872 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 GRIN3BO60391 1043 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 CD33P20138 364 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 NOS2P35228 1153 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 DDR1Q08345 913 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 EHHADHQ08426 723 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 TEFQ10587 303 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 AAMPQ13685 434 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 C11orf91Q3C1V1 193 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
VMP1-213ENST00000591877 ZNF496Q96IT1 587 aaPredicted RBP9.94□□□□□ -0.82
VMP1-213ENST00000591877 NRXN2Q9P2S2 1712 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 HEG1Q9ULI3 1381 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 ATXN7O15265 892 aaPredicted RBP9.93□□□□□ -0.82
VMP1-213ENST00000591877 DYRK3O43781 588 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 MZF1P28698 734 aaPredicted RBP9.93□□□□□ -0.82
VMP1-213ENST00000591877 TM4SF1P30408 202 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 PCBP4P57723 403 aaKnown RBP9.93□□□□□ -0.82
VMP1-213ENST00000591877 USPL1Q5W0Q7 1092 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 NBPF11Q86T75 865 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 ALDH16A1Q8IZ83 802 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 GJD3Q8N144 294 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 ZDHHC1Q8WTX9 485 aa9.93□□□□□ -0.82
VMP1-213ENST00000591877 COL15A1P39059 1388 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 ARFGEF1Q9Y6D6 1849 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 A0A0G2JLW4 131 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 KCNA3P22001 575 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 TGFB2P61812 414 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 DCTN1Q14203 1278 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 MCM10Q7L590 875 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 TTC5Q8N0Z6 440 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 NARFQ9UHQ1 456 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 ZNF232Q9UNY5 417 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 PARP3Q9Y6F1 533 aa9.92□□□□□ -0.82
VMP1-213ENST00000591877 SCN7AQ01118 1682 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 POLRMTO00411 1230 aaKnown RBP9.91□□□□□ -0.82
VMP1-213ENST00000591877 GPR182O15218 404 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 LDHBP07195 334 aaKnown RBP9.91□□□□□ -0.82
VMP1-213ENST00000591877 MAPTP10636 758 aaKnown RBP9.91□□□□□ -0.82
VMP1-213ENST00000591877 DPEP1P16444 411 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
VMP1-213ENST00000591877 EIF5P55010 431 aaKnown RBP9.91□□□□□ -0.82
VMP1-213ENST00000591877 ATP2B2Q01814 1243 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 PLEKHF1Q96S99 279 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 NIFKQ9BYG3 293 aaKnown RBP9.91□□□□□ -0.82
VMP1-213ENST00000591877 KRTAP9-9Q9BYP9 154 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 KRTAP9-4Q9BYQ2 154 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 KDM3BQ7LBC6 1761 aa9.91□□□□□ -0.82
VMP1-213ENST00000591877 PRAMEF22A3QJZ6 481 aa9.9□□□□□ -0.82
VMP1-213ENST00000591877 BTBD11A6QL63 1104 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms