RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 MAPKAPK5Q8IW41 473 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 RAET1EQ8TD07 263 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 FAM151AQ8WW52 585 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 ZNF341Q9BYN7 854 aa25.82■■□□□ 1.72
R3HDM4-206ENST00000590454 FMNL1O95466 1100 aaPredicted RBP25.81■■□□□ 1.72
R3HDM4-206ENST00000590454 CTGFP29279 349 aa25.81■■□□□ 1.72
R3HDM4-206ENST00000590454 GRK4P32298 578 aa25.81■■□□□ 1.72
R3HDM4-206ENST00000590454 TRIM47Q96LD4 638 aa25.81■■□□□ 1.72
R3HDM4-206ENST00000590454 HTATIP2Q9BUP3 242 aa25.81■■□□□ 1.72
R3HDM4-206ENST00000590454 A0A0D9SFI3 127 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 ENTPD3O75355 529 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 OSBPP22059 807 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 GJA8P48165 433 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 NMIQ13287 307 aaPredicted RBP25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 CCDC129Q6ZRS4 1044 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 SDR42E1Q8WUS8 393 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 GTF3C3Q9Y5Q9 886 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 FLT1P17948 1338 aa25.8■■□□□ 1.72
R3HDM4-206ENST00000590454 ZSWIM8A7E2V4 1837 aa25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 DDTLA6NHG4 134 aaPredicted RBP25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 PDHXO00330 501 aa25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 GJB1P08034 283 aa25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 SLURP2P0DP57 97 aa25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 LRRFIP1Q32MZ4 808 aaKnown RBP25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 MIGA2Q7L4E1 593 aa25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 STRBPQ96SI9 672 aaKnown RBP25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 OSBPL5Q9H0X9 879 aaPredicted RBP25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 RPAP1Q9BWH6 1393 aaPredicted RBP25.79■■□□□ 1.72
R3HDM4-206ENST00000590454 SAP30BPQ9UHR5 308 aaKnown RBP25.78■■□□□ 1.72
R3HDM4-206ENST00000590454 MYPNQ86TC9 1320 aa25.78■■□□□ 1.72
R3HDM4-206ENST00000590454 GPAA1O43292 621 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 NPM3O75607 178 aaKnown RBP25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 CCL5P13501 91 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 INPP5BP32019 993 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 USP5P45974 858 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 UBXN2AP68543 259 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 UBE2Q1Q7Z7E8 422 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 CRNKL1Q9BZJ0 848 aaKnown RBP25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 RNF208Q9H0X6 261 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 BIN2Q9UBW5 565 aaPredicted RBP25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 KCNH4Q9UQ05 1017 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 NR2E3Q9Y5X4 410 aa25.77■■□□□ 1.72
R3HDM4-206ENST00000590454 CERS3Q8IU89 383 aa25.76■■□□□ 1.71
R3HDM4-206ENST00000590454 ADGRA2Q96PE1 1338 aa25.76■■□□□ 1.71
R3HDM4-206ENST00000590454 EVX2Q03828 476 aa25.75■■□□□ 1.71
R3HDM4-206ENST00000590454 BMP2KLQ5H9B9 411 aa25.75■■□□□ 1.71
R3HDM4-206ENST00000590454 IL25Q9H293 177 aa25.75■■□□□ 1.71
R3HDM4-206ENST00000590454 ZNF112Q9UJU3 913 aa25.75■■□□□ 1.71
R3HDM4-206ENST00000590454 PALD1Q9ULE6 856 aa25.75■■□□□ 1.71
R3HDM4-206ENST00000590454 SLC4A4Q9Y6R1 1079 aa25.75■■□□□ 1.71
R3HDM4-206ENST00000590454 DDX60LQ5H9U9 1706 aaKnown RBP25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 CWC27Q6UX04 472 aaKnown RBP25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 ZNF589Q86UQ0 364 aaPredicted RBP25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 TICAM2Q86XR7 235 aa25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 ZSCAN29Q8IWY8 852 aaPredicted RBP25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 PRO3102Q9H379 93 aa25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 DCP1AQ9NPI6 582 aaPredicted RBP25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 HELLSQ9NRZ9 838 aa25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 MYH1P12882 1939 aa25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 NAV1Q8NEY1 1877 aa25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 SIPA1L1O43166 1804 aa25.74■■□□□ 1.71
R3HDM4-206ENST00000590454 ATRNL1Q5VV63 1379 aa25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 TRIOBPQ9H2D6 2365 aa25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 FOXP2O15409 715 aa25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 CHMLP26374 656 aa25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 FCGRTP55899 365 aa25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 PARK7Q99497 189 aaKnown RBP25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 DIAPH3Q9NSV4 1193 aa25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 BAZ2AQ9UIF9 1905 aaKnown RBP25.73■■□□□ 1.71
R3HDM4-206ENST00000590454 GSG1L2A8MUP6 293 aa25.72■■□□□ 1.71
R3HDM4-206ENST00000590454 PRKCZQ05513 592 aa25.72■■□□□ 1.71
R3HDM4-206ENST00000590454 MCMDC2Q4G0Z9 681 aa25.72■■□□□ 1.71
R3HDM4-206ENST00000590454 SLAIN1Q8ND83 568 aa25.72■■□□□ 1.71
R3HDM4-206ENST00000590454 COL2A1P02458 1487 aaPredicted RBP25.72■■□□□ 1.71
R3HDM4-206ENST00000590454 FAM196BA6NMK8 535 aa25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 SMIM22K7EJ46 135 aa25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 CYP2D6P10635 497 aa25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 MOGSQ13724 837 aa25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 NOL9Q5SY16 702 aaKnown RBP25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 VPS53Q5VIR6 699 aa25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 U2AF1L4Q8WU68 220 aaKnown RBP25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 EPB41L4AQ9HCS5 686 aaPredicted RBP25.71■■□□□ 1.71
R3HDM4-206ENST00000590454 CXCL11O14625 94 aa25.7■■□□□ 1.7
R3HDM4-206ENST00000590454 FARP2O94887 1054 aaPredicted RBP25.7■■□□□ 1.7
R3HDM4-206ENST00000590454 BCRP11274 1271 aa25.7■■□□□ 1.7
R3HDM4-206ENST00000590454 CYP2D7A0A087X1C5 515 aa25.69■■□□□ 1.7
R3HDM4-206ENST00000590454 HIP1O00291 1037 aa25.69■■□□□ 1.7
R3HDM4-206ENST00000590454 SLC17A8Q8NDX2 589 aa25.69■■□□□ 1.7
R3HDM4-206ENST00000590454 ATP8A2Q9NTI2 1148 aa25.69■■□□□ 1.7
R3HDM4-206ENST00000590454 MCM9Q9NXL9 1143 aa25.69■■□□□ 1.7
R3HDM4-206ENST00000590454 CEP290O15078 2479 aa25.69■■□□□ 1.7
R3HDM4-206ENST00000590454 SGPL1O95470 568 aa25.68■■□□□ 1.7
R3HDM4-206ENST00000590454 CAPN2P17655 700 aa25.68■■□□□ 1.7
R3HDM4-206ENST00000590454 PLCD1P51178 756 aa25.68■■□□□ 1.7
R3HDM4-206ENST00000590454 GPAT2Q6NUI2 795 aa25.68■■□□□ 1.7
R3HDM4-206ENST00000590454 CCDC171Q6TFL3 1326 aa25.67■■□□□ 1.7
R3HDM4-206ENST00000590454 A0A1W2PPC1 479 aa25.67■■□□□ 1.7
R3HDM4-206ENST00000590454 PATL2C9JE40 543 aaKnown RBP25.67■■□□□ 1.7
R3HDM4-206ENST00000590454 APPP05067 770 aa25.67■■□□□ 1.7
R3HDM4-206ENST00000590454 CYP2C8P10632 490 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms