RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 DOCK2Q92608 1830 aa19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 SLFN14P0C7P3 912 aa19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 WTAPQ15007 396 aa19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 PTPN21Q16825 1174 aa19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 ZNF579Q8NAF0 562 aaKnown RBP19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 MLKLQ8NB16 471 aa19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 NACAP1Q9BZK3 213 aa19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 RTL9Q8NET4 1388 aa19.31■□□□□ 0.68
PRKCSH-205ENST00000587327 SNAP23O00161 211 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 FANCGO15287 622 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 PRKAB2O43741 272 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 ZNF18P17022 549 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 GNAT2P19087 354 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 FAM98CQ17RN3 349 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 CRACR2BQ8N4Y2 399 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 ENOX1Q8TC92 643 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 ZKSCAN3Q9BRR0 538 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 SRRTQ9BXP5 876 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 CCDC196A0A1B0GTZ2 297 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 DEXIO95424 95 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 TDO2P48775 406 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 FMR1Q06787 632 aaKnown RBP eCLIP19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 RRP12Q5JTH9 1297 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 TMTC2Q8N394 836 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 MTA3Q9BTC8 594 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 SERTAD1Q9UHV2 236 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 DACH1Q9UI36 760 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 NFE2L3Q9Y4A8 694 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 PCDHB6Q9Y5E3 794 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 PNPLA7Q6ZV29 1317 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 BCL9LQ86UU0 1499 aa19.3■□□□□ 0.68
PRKCSH-205ENST00000587327 TIAM2Q8IVF5 1701 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 TOM1O60784 492 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 MORC3Q14149 939 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 CCDC152Q4G0S7 254 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 ARHGAP29Q52LW3 1261 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 HSP90AA4PQ58FG1 418 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 CCDC82Q8N4S0 544 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 LINC00116Q8NCU8 138 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 SMARCE1Q969G3 411 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 BAG1Q99933 345 aaPredicted RBP19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 NOL10Q9BSC4 688 aaKnown RBP19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 TOMM22Q9NS69 142 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 PPP2R2CQ9Y2T4 447 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 SRPRBQ9Y5M8 271 aaKnown RBP19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 ERICH2A1L162 156 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 VWA3AA6NCI4 1184 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 PRR29P0C7W0 189 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 RCAN1P53805 252 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 NR5A1Q13285 461 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 BMS1Q14692 1282 aaKnown RBP19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 TERF2Q15554 542 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 SPECC1LQ69YQ0 1117 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 ZNF771Q7L3S4 317 aaPredicted RBP19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 LCORLQ8N3X6 602 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 TRIML1Q8N9V2 468 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 SLC4A4Q9Y6R1 1079 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 CHD4Q14839 1912 aa19.29■□□□□ 0.68
PRKCSH-205ENST00000587327 STX10O60499 249 aa19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 CDK11BP21127 795 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 CLCN6P51797 869 aa19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 KANK3Q6NY19 840 aa19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 CMTR1Q8N1G2 835 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 FANCBQ8NB91 859 aa19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 UBXN4Q92575 508 aa19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 PARP3Q9Y6F1 533 aa19.28■□□□□ 0.68
PRKCSH-205ENST00000587327 URI1O94763 535 aaPredicted RBP19.27■□□□□ 0.68
PRKCSH-205ENST00000587327 TC2NQ8N9U0 490 aa19.27■□□□□ 0.68
PRKCSH-205ENST00000587327 SPATA20Q8TB22 786 aa19.27■□□□□ 0.68
PRKCSH-205ENST00000587327 CEP131Q9UPN4 1083 aa19.27■□□□□ 0.68
PRKCSH-205ENST00000587327 PDILTQ8N807 584 aa19.27■□□□□ 0.68
PRKCSH-205ENST00000587327 CASZ1Q86V15 1759 aa19.27■□□□□ 0.68
PRKCSH-205ENST00000587327 SCN7AQ01118 1682 aa19.27■□□□□ 0.67
PRKCSH-205ENST00000587327 GOLGA6L9A6NEM1 432 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 ACTN4O43707 911 aaKnown RBP19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 ZNF827Q17R98 1081 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 MNS1Q8NEH6 495 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 OXER1Q8TDS5 423 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 MED15Q96RN5 788 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 RNF41Q9H4P4 317 aaPredicted RBP19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 ZNF652Q9Y2D9 606 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 FHOD1Q9Y613 1164 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 A0A1B0GUL6 1792 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 EFCAB8A8MWE9 144 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 TADA3O75528 432 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 VPS72Q15906 364 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 GRAMD1CQ8IYS0 662 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 ZNF654Q8IZM8 581 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 C8orf37Q96NL8 207 aa19.26■□□□□ 0.67
PRKCSH-205ENST00000587327 IGHMBP2P38935 993 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 BCAMP50895 628 aa19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 ADKP55263 362 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 USP49Q70CQ1 688 aa19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 NUP133Q8WUM0 1156 aa19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 CSRNP2Q9H175 543 aa19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 CABP5Q9NP86 173 aa19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 ERCC5P28715 1186 aaPredicted RBP19.25■□□□□ 0.67
PRKCSH-205ENST00000587327 KCNQ4P56696 695 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms