RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 RBM28Q9NW13 759 aaKnown RBP7.48□□□□□ -1.21
SMAD4-203ENST00000585448 CALCOCO1Q9P1Z2 691 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 PCDHA4Q9UN74 947 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 R3HCC1Q9Y3T6 440 aaKnown RBP7.48□□□□□ -1.21
SMAD4-203ENST00000585448 PCDHB5Q9Y5E4 795 aa7.48□□□□□ -1.21
SMAD4-203ENST00000585448 E9PSI1 815 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 TULP2O00295 520 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 IGLV1-40P01703 118 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 FSTP19883 344 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 LMNB1P20700 586 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 NTF4P34130 210 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 ZNF76P36508 570 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 KCNJ4P48050 445 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 RPL6Q02878 288 aaKnown RBP7.47□□□□□ -1.21
SMAD4-203ENST00000585448 PTPN11Q06124 597 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-203ENST00000585448 NFIAQ12857 509 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 CAMK2GQ13555 558 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-203ENST00000585448 PRSS36Q5K4E3 855 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 PAOXQ6QHF9 649 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 FAM43BQ6ZT52 329 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-203ENST00000585448 HDXQ7Z353 690 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 NBPF11Q86T75 865 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 FBLIM1Q8WUP2 373 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 MYCBPQ99417 103 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-203ENST00000585448 KCNF1Q9H3M0 494 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 SEMA6BQ9H3T3 888 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 RAI14Q9P0K7 980 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 CEP164Q9UPV0 1460 aa7.47□□□□□ -1.21
SMAD4-203ENST00000585448 ROBO2Q9HCK4 1378 aa7.46□□□□□ -1.21
SMAD4-203ENST00000585448 TTC36A6NLP5 189 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 GFRA2O00451 464 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 GARTP22102 1010 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 SATB1Q01826 763 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 TTLL4Q14679 1199 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 MAP3K11Q16584 847 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 ZBTB37Q5TC79 503 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 LRFN4Q6PJG9 635 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 TMED8Q6PL24 325 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-203ENST00000585448 ZNF771Q7L3S4 317 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-203ENST00000585448 KCT2Q8NC54 265 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 GATAD2BQ8WXI9 593 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 FEZ1Q99689 392 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 LRRC3Q9BY71 257 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 PANK2Q9BZ23 570 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 PIDD1Q9HB75 910 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 KBTBD4Q9NVX7 518 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 TLR6Q9Y2C9 796 aa7.46□□□□□ -1.22
SMAD4-203ENST00000585448 HMX2A2RU54 273 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 FAM221AA4D161 298 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 CILPO75339 1184 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 GBP2P32456 591 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-203ENST00000585448 CAP2P40123 477 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 HMGN5P82970 282 aaKnown RBP7.45□□□□□ -1.22
SMAD4-203ENST00000585448 INPP5AQ14642 412 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 SMYD4Q8IYR2 804 aaPredicted RBP7.45□□□□□ -1.22
SMAD4-203ENST00000585448 BRMS1Q9HCU9 246 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 PRKAG2Q9UGJ0 569 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 GGT7Q9UJ14 662 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 PCOLCE2Q9UKZ9 415 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 RB1CC1Q8TDY2 1594 aa7.45□□□□□ -1.22
SMAD4-203ENST00000585448 SCAPERQ9BY12 1400 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 GREM1O60565 184 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 PF4P02776 101 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 NFICP08651 508 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 CALRP27797 417 aaKnown RBP7.44□□□□□ -1.22
SMAD4-203ENST00000585448 RXRBP28702 533 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 SEPT6Q14141 434 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 NBPF9Q3BBW0 867 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 GATA6Q92908 595 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 RNF34Q969K3 372 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 ELMO3Q96BJ8 720 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 PLPPR2Q96GM1 343 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 C1GALT1Q9NS00 363 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 BSDC1Q9NW68 430 aaPredicted RBP7.44□□□□□ -1.22
SMAD4-203ENST00000585448 CEP83Q9Y592 693 aa7.44□□□□□ -1.22
SMAD4-203ENST00000585448 RAB6AP20340 208 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 MCM4P33991 863 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 SSR1P43307 286 aaKnown RBP7.43□□□□□ -1.22
SMAD4-203ENST00000585448 RBM25P49756 843 aaKnown RBP7.43□□□□□ -1.22
SMAD4-203ENST00000585448 MPP2Q14168 576 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 SKOR2Q2VWA4 1001 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-203ENST00000585448 WIPI1Q5MNZ9 446 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-203ENST00000585448 FAM196AQ6ZSG2 479 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 ZAR1Q86SH2 424 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 NGEFQ8N5V2 710 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 ISL2Q96A47 359 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 PSMG3-AS1Q96PY0 264 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 NCAPGQ9BPX3 1015 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 WNT10AQ9GZT5 417 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 RNF112Q9ULX5 631 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 PRR36Q9H6K5 1346 aa7.43□□□□□ -1.22
SMAD4-203ENST00000585448 RSF1Q96T23 1441 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-203ENST00000585448 DCDC2CA8MYV0 355 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 MAFGO15525 162 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 KIF1CO43896 1103 aaKnown RBP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 IGSF3O75054 1194 aa7.42□□□□□ -1.22
SMAD4-203ENST00000585448 HCLS1P14317 486 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 GTF2F1P35269 517 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 EIF4A3P38919 411 aaKnown RBP7.42□□□□□ -1.22
SMAD4-203ENST00000585448 CBX1P83916 185 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms