RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 DCPSQ96C86 337 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ZSWIM5Q9P217 1185 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SSC5DA1L4H1 1573 aa19.7■□□□□ 0.74
CDK5RAP3-230ENST00000584042 MAP3K10Q02779 954 aa19.69■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TOB2Q14106 344 aaPredicted RBP19.69■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SULF1Q8IWU6 871 aa19.69■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ZNF444Q8N0Y2 327 aaPredicted RBP19.69■□□□□ 0.74
CDK5RAP3-230ENST00000584042 CCDC17Q96LX7 622 aa19.69■□□□□ 0.74
CDK5RAP3-230ENST00000584042 UBAC1Q9BSL1 405 aa19.69■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ANGEL1Q9UNK9 670 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TSPY3P0CV98 308 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TSPY8P0CW00 308 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 VEGFAP15692 232 aaPredicted RBP19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 FGD1P98174 961 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 CCDC178Q5BJE1 867 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 CHST3Q7LGC8 479 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 NEDD1Q8NHV4 660 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 LRRC2Q9BYS8 371 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TBC1D2Q9BYX2 928 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TCP11L1Q9NUJ3 509 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 DOCK1Q14185 1865 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TNKSO95271 1327 aa19.68■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ERICH2A1L162 156 aa19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 FAM196BA6NMK8 535 aa19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 K7ELQ4 463 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 LIFRP42702 1097 aa19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TFAP4Q01664 338 aa19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 EAPPQ56P03 285 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 DCAF15Q66K64 600 aa19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SGMS1Q86VZ5 419 aa19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ZSCAN10Q96SZ4 725 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SCAF8Q9UPN6 1271 aaKnown RBP19.67■□□□□ 0.74
CDK5RAP3-230ENST00000584042 IFIT3O14879 490 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 EVCP57679 992 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SEC23AQ15436 765 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 TMEM67Q5HYA8 995 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 FAM47AQ5JRC9 791 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 IGDCC4Q8TDY8 1250 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 BRF1Q92994 677 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 LY9Q9HBG7 655 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 LIMCH1Q9UPQ0 1083 aa19.66■□□□□ 0.74
CDK5RAP3-230ENST00000584042 IGKV6D-41A0A0C4DH26 115 aa19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 AKR1B1P15121 316 aa19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 WTAPQ15007 396 aa19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 CERKLQ49MI3 558 aaPredicted RBP19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 PPP4R3BQ5MIZ7 849 aa19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 KRT26Q7Z3Y9 468 aa19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ENAHQ8N8S7 591 aaPredicted RBP19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 SH2B1Q9NRF2 756 aaPredicted RBP19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 NID2Q14112 1375 aa19.65■□□□□ 0.74
CDK5RAP3-230ENST00000584042 OTOFQ9HC10 1997 aa19.64■□□□□ 0.74
CDK5RAP3-230ENST00000584042 ADM5C9JUS6 153 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 SLURP2P0DP57 97 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 NOVP48745 357 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 SUPT20HL1Q3ZLR7 823 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 NBPF12Q5TAG4 269 aaPredicted RBP19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 TMEM179Q6ZVK1 233 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 LDHDQ86WU2 507 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZSCAN31Q96LW9 406 aaPredicted RBP19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZKSCAN3Q9BRR0 538 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 RRAGCQ9HB90 399 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 MYH4Q9Y623 1939 aa19.64■□□□□ 0.73
CDK5RAP3-230ENST00000584042 RCAN1P53805 252 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 NOL8Q76FK4 1167 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 DGKHQ86XP1 1220 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 TMTC2Q8N394 836 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ANKS1AQ92625 1134 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZNF341Q9BYN7 854 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 NMRK2Q9NPI5 230 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GPHNQ9NQX3 736 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 IL17RBQ9NRM6 502 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 TPCN1Q9ULQ1 816 aa19.63■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ABCB5Q2M3G0 1257 aa19.62■□□□□ 0.73
CDK5RAP3-230ENST00000584042 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CDC37L1Q7L3B6 337 aa19.62■□□□□ 0.73
CDK5RAP3-230ENST00000584042 MIGA2Q7L4E1 593 aa19.62■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZNF274Q96GC6 653 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-230ENST00000584042 TMX3Q96JJ7 454 aa19.62■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GINM1Q9NU53 330 aa19.62■□□□□ 0.73
CDK5RAP3-230ENST00000584042 KLF18A0A0U1RQI7 1052 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 PHF20L1A8MW92 1017 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 NMT2O60551 498 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GDF11O95390 407 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 APOBRQ0VD83 1088 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 RCSD1Q6JBY9 416 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CEP95Q96GE4 821 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 IPO9Q96P70 1041 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 ZBTB21Q9ULJ3 1066 aa19.61■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CCDC69A6NI79 296 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 GOLGA8BA8MQT2 603 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 MPHOSPH10O00566 681 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 DDAH1O94760 285 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 LARGE1O95461 756 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 POTEIP0CG38 1075 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 POTEJP0CG39 1038 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 CAP2P40123 477 aa19.6■□□□□ 0.73
CDK5RAP3-230ENST00000584042 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms