RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 NUDT12Q9BQG2 462 aa12.47□□□□□ -0.41
PPP4R1-224ENST00000583092 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
PPP4R1-224ENST00000583092 PIH1D3Q9NQM4 214 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-224ENST00000583092 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-224ENST00000583092 SAP30BPQ9UHR5 308 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-224ENST00000583092 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-224ENST00000583092 EVI5O60447 810 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 GDF11O95390 407 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 HMGCRP04035 888 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 MAPK4P31152 587 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 CCNA1P78396 465 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 CEP85Q6P2H3 762 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 RPAP2Q8IXW5 612 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 MIGA1Q8NAN2 632 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 HMX1Q9NP08 348 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 SERPINB13Q9UIV8 391 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 DDX19BQ9UMR2 479 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 EXOC6BQ9Y2D4 811 aa12.46□□□□□ -0.41
PPP4R1-224ENST00000583092 ZBED9Q6R2W3 1325 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 DYNLL1P63167 89 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 CERKLQ49MI3 558 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 METTL16Q86W50 562 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 SOCS4Q8WXH5 440 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 KIF1BPQ96EK5 621 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 P2RX7Q99572 595 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 CRNKL1Q9BZJ0 848 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 ZBTB21Q9ULJ3 1066 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 COLQQ9Y215 455 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 DOCK2Q92608 1830 aa12.45□□□□□ -0.42
PPP4R1-224ENST00000583092 RPTORQ8N122 1335 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 RLBP1P12271 317 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 HERVK_113P62684 666 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 RAB3GAP1Q15042 981 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 ABCB5Q2M3G0 1257 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 NECAB2Q7Z6G3 386 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 MORF4L1Q9UBU8 362 aa12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 TNRC18O15417 2968 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-224ENST00000583092 RBBP6Q7Z6E9 1792 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 APBB1O00213 710 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 GH2P01242 217 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 CYP2B6P20813 491 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 RRP1BQ14684 758 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 SLC9C2Q5TAH2 1124 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 PANK1Q8TE04 598 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.423e-7■■■□□ 15.9
PPP4R1-224ENST00000583092 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.43□□□□□ -0.421e-10■■■■■ 30
PPP4R1-224ENST00000583092 EHD4Q9H223 541 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 IL1RAPL2Q9NP60 686 aa12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 TLR7Q9NYK1 1049 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-224ENST00000583092 CEP290O15078 2479 aa12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 MPHOSPH10O00566 681 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 RGS2P41220 211 aa12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 WDR78Q5VTH9 848 aa12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 PAK6Q9NQU5 681 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 MCM9Q9NXL9 1143 aa12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 IVNS1ABPQ9Y6Y0 642 aa12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 DOCK1Q14185 1865 aa12.42□□□□□ -0.42
PPP4R1-224ENST00000583092 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 ERVK-9P63128 1117 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 ERVK-24P63145 666 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 ZYXQ15942 572 aaKnown RBP12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 TATDN1Q6P1N9 297 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 PLEKHH3Q7Z736 793 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 GJD2Q9UKL4 321 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 RABGAP1Q9Y3P9 1069 aa12.41□□□□□ -0.42
PPP4R1-224ENST00000583092 GOLIM4O00461 696 aa12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 FXR1P51114 621 aaKnown RBP eCLIP12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 MFSD14CQ5VZR4 134 aa12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 ZSCAN25Q6NSZ9 544 aa12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 KIAA1683Q9H0B3 1180 aa12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 CRISPLD2Q9H0B8 497 aa12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 DNAJC18Q9H819 358 aa12.4□□□□□ -0.42
PPP4R1-224ENST00000583092 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms