RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 FAM173BQ6P4H8 233 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
MKS1-211ENST00000581761 FAM217BQ9NTX9 383 aaPredicted RBP17.05■□□□□ 0.32
MKS1-211ENST00000581761 RBM27Q9P2N5 1060 aaKnown RBP17.05■□□□□ 0.32
MKS1-211ENST00000581761 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
MKS1-211ENST00000581761 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 TOMM70O94826 608 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 NT5C2P49902 561 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 RHBDL3P58872 404 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 SSRP1Q08945 709 aaKnown RBP17.04■□□□□ 0.32
MKS1-211ENST00000581761 FAM47AQ5JRC9 791 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
MKS1-211ENST00000581761 ENAHQ8N8S7 591 aaPredicted RBP17.04■□□□□ 0.32
MKS1-211ENST00000581761 DYNLL2Q96FJ2 89 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 VPS33BQ9H267 617 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 TCHHQ07283 1943 aa17.04■□□□□ 0.32
MKS1-211ENST00000581761 FLT1P17948 1338 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 GOLGA6L3A6NEY3 463 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 UBE2HP62256 183 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 NTRK3Q16288 839 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 CATIPQ7Z7H3 387 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 PHKBQ93100 1093 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 ALG1Q9BT22 464 aa17.03■□□□□ 0.32
MKS1-211ENST00000581761 CCDC196A0A1B0GTZ2 297 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 YDJCA8MPS7 323 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 POTECB2RU33 542 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
MKS1-211ENST00000581761 SCNN1DP51172 638 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 FKBP1AP62942 108 aaKnown RBP17.02■□□□□ 0.32
MKS1-211ENST00000581761 DPY19L2Q6NUT2 758 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 JDP2Q8WYK2 163 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 SCAND2PQ9GZW5 306 aaPredicted RBP17.02■□□□□ 0.32
MKS1-211ENST00000581761 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
MKS1-211ENST00000581761 CDK5RAP2Q96SN8 1893 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 DDAH1O94760 285 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 FMNL1O95466 1100 aaPredicted RBP17.01■□□□□ 0.31
MKS1-211ENST00000581761 HSPA6P17066 643 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 IFNAR1P17181 557 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 TPRNQ4KMQ1 711 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 L1TD1Q5T7N2 865 aaKnown RBP17.01■□□□□ 0.31
MKS1-211ENST00000581761 STRIP1Q5VSL9 837 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 FANCBQ8NB91 859 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 FBXO18Q8NFZ0 1043 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
MKS1-211ENST00000581761 ZNF396Q96N95 335 aaPredicted RBP17.01■□□□□ 0.31
MKS1-211ENST00000581761 KCNQ5Q9NR82 932 aa17.01■□□□□ 0.31
MKS1-211ENST00000581761 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
MKS1-211ENST00000581761 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
MKS1-211ENST00000581761 ELP1O95163 1332 aa17■□□□□ 0.31
MKS1-211ENST00000581761 USP17L3A6NCW0 530 aa17■□□□□ 0.31
MKS1-211ENST00000581761 USP17L4A6NCW7 530 aa17■□□□□ 0.31
MKS1-211ENST00000581761 CALM1P0DP23 149 aa17■□□□□ 0.31
MKS1-211ENST00000581761 CALM2P0DP24 149 aa17■□□□□ 0.31
MKS1-211ENST00000581761 CALM3P0DP25 149 aa17■□□□□ 0.31
MKS1-211ENST00000581761 PLCD1P51178 756 aa17■□□□□ 0.31
MKS1-211ENST00000581761 TFAP4Q01664 338 aa17■□□□□ 0.31
MKS1-211ENST00000581761 PPP2R5BQ15173 497 aa17■□□□□ 0.31
MKS1-211ENST00000581761 ZSCAN23Q3MJ62 389 aa17■□□□□ 0.31
MKS1-211ENST00000581761 CCDC178Q5BJE1 867 aa17■□□□□ 0.31
MKS1-211ENST00000581761 DACT2Q5SW24 774 aa17■□□□□ 0.31
MKS1-211ENST00000581761 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
MKS1-211ENST00000581761 TRIM22Q8IYM9 498 aa17■□□□□ 0.31
MKS1-211ENST00000581761 ZNF444Q8N0Y2 327 aaPredicted RBP17■□□□□ 0.31
MKS1-211ENST00000581761 WASF1Q92558 559 aa17■□□□□ 0.31
MKS1-211ENST00000581761 SPATA32Q96LK8 384 aa17■□□□□ 0.31
MKS1-211ENST00000581761 AIFM3Q96NN9 605 aa17■□□□□ 0.31
MKS1-211ENST00000581761 ZNF287Q9HBT7 754 aa17■□□□□ 0.31
MKS1-211ENST00000581761 USP40Q9NVE5 1235 aa17■□□□□ 0.31
MKS1-211ENST00000581761 RBM28Q9NW13 759 aaKnown RBP17■□□□□ 0.31
MKS1-211ENST00000581761 TMEM63CQ9P1W3 806 aa17■□□□□ 0.31
MKS1-211ENST00000581761 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
MKS1-211ENST00000581761 FSD2A1L4K1 749 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 NMT2O60551 498 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 CRKP46108 304 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 CXCL9Q07325 125 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 PICALMQ13492 652 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 TRIM29Q14134 588 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 SLC44A5Q8NCS7 719 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
MKS1-211ENST00000581761 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
MKS1-211ENST00000581761 CFAP45Q9UL16 551 aa16.99■□□□□ 0.31
MKS1-211ENST00000581761 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
MKS1-211ENST00000581761 ECM29Q5VYK3 1845 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 MYH1P12882 1939 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 TSPY3P0CV98 308 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 TSPY8P0CW00 308 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
MKS1-211ENST00000581761 CDK8P49336 464 aa16.98■□□□□ 0.31
MKS1-211ENST00000581761 ZNF445P59923 1031 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms