RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 CHAF1AQ13111 956 aaPredicted RBP11.11□□□□□ -0.63
BPTF-211ENST00000578307 ZRSR1Q15695 479 aaKnown RBP11.11□□□□□ -0.63
BPTF-211ENST00000578307 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
BPTF-211ENST00000578307 DLEC1Q9Y238 1755 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 CMA1P23946 247 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 TM4SF1P30408 202 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 AMIGO3Q86WK7 504 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 IQCA1Q86XH1 822 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 FANCBQ8NB91 859 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 SPC24Q8NBT2 197 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 ZNF384Q8TF68 577 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
BPTF-211ENST00000578307 TRIM5Q9C035 493 aa11.11□□□□□ -0.63
BPTF-211ENST00000578307 NAT10Q9H0A0 1025 aaKnown RBP11.11□□□□□ -0.63
BPTF-211ENST00000578307 TTC12Q9H892 705 aaPredicted RBP11.11□□□□□ -0.63
BPTF-211ENST00000578307 KIAA1551Q9HCM1 1747 aa11.1□□□□□ -0.63
BPTF-211ENST00000578307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
BPTF-211ENST00000578307 BECN2A8MW95 431 aa11.1□□□□□ -0.63
BPTF-211ENST00000578307 MMP1P03956 469 aa11.1□□□□□ -0.63
BPTF-211ENST00000578307 SLFN14P0C7P3 912 aa11.1□□□□□ -0.63
BPTF-211ENST00000578307 SEC23AQ15436 765 aa11.1□□□□□ -0.63
BPTF-211ENST00000578307 SPTY2D1Q68D10 685 aaPredicted RBP11.1□□□□□ -0.63
BPTF-211ENST00000578307 FAM196AQ6ZSG2 479 aa11.1□□□□□ -0.63
BPTF-211ENST00000578307 C11orf57Q6ZUT1 292 aaPredicted RBP11.1□□□□□ -0.63
BPTF-211ENST00000578307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.1□□□□□ -0.63
BPTF-211ENST00000578307 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
BPTF-211ENST00000578307 CRACR2BQ8N4Y2 399 aaPredicted RBP11.1□□□□□ -0.63
BPTF-211ENST00000578307 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
BPTF-211ENST00000578307 SLC3A2P08195 630 aaKnown RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 PFKFB1P16118 471 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 MARCKSP29966 332 aaPredicted RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 ZNF75DP51815 510 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 GRAPQ13588 217 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 IQCB1Q15051 598 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 NOSTRINQ8IVI9 506 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 DRC7Q8IY82 874 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 CNBD1Q8NA66 436 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 GRAPLQ8TC17 118 aaPredicted RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 PIBF1Q8WXW3 757 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
BPTF-211ENST00000578307 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 CYP2D7A0A087X1C5 515 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 USP17L21D6R901 530 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 IGSF3O75054 1194 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 ZNF202O95125 648 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 FGRP09769 529 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 GUCY1A2P33402 732 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 AKAP17AQ02040 695 aaKnown RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 NFIXQ14938 502 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 PTPAQ15257 358 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 CATIPQ7Z7H3 387 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 DIS3L2Q8IYB7 885 aaKnown RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 CCDC82Q8N4S0 544 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 MAP3K14Q99558 947 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 RNF26Q9BY78 433 aaPredicted RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 BRMS1Q9HCU9 246 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
BPTF-211ENST00000578307 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
BPTF-211ENST00000578307 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 WDHD1O75717 1129 aaPredicted RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 CALM1P0DP23 149 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 CALM2P0DP24 149 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 CALM3P0DP25 149 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 CAPN2P17655 700 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 XBP1P17861 261 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 PRDX5P30044 214 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 ENAHQ8N8S7 591 aaPredicted RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 FOXP1Q9H334 677 aaPredicted RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 RBM28Q9NW13 759 aaKnown RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 AFF2P51816 1311 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 BTBD18B2RXH4 712 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 CUTAO60888 179 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 PRDM1O75626 825 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 SYKP43405 635 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 RILPL1Q5EBL4 403 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 SARM1Q6SZW1 724 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 MYCBPQ99417 103 aaPredicted RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 TRPC5Q9UL62 973 aaPredicted RBP11.08□□□□□ -0.64
BPTF-211ENST00000578307 KCNJ14Q9UNX9 436 aa11.08□□□□□ -0.64
BPTF-211ENST00000578307 MROH7-TTC4A0A0A0MT08 1334 aa11.07□□□□□ -0.64
BPTF-211ENST00000578307 XDHP47989 1333 aa11.07□□□□□ -0.64
BPTF-211ENST00000578307 IRS2Q9Y4H2 1338 aa11.07□□□□□ -0.64
BPTF-211ENST00000578307 SMIM22K7EJ46 135 aa11.07□□□□□ -0.64
BPTF-211ENST00000578307 ORC4O43929 436 aa11.07□□□□□ -0.64
BPTF-211ENST00000578307 ONECUT3O60422 494 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms