RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 TREML2Q5T2D2 321 aa11.71□□□□□ -0.53
NPLOC4-216ENST00000574344 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-216ENST00000574344 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-216ENST00000574344 SRRDQ9UH36 339 aa11.71□□□□□ -0.53
NPLOC4-216ENST00000574344 PDE6AP16499 860 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 CTGFP29279 349 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 MTMR2Q13614 643 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 FOXP4Q8IVH2 680 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 ANKRD13CQ8N6S4 541 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 CCDC136Q96JN2 1154 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
NPLOC4-216ENST00000574344 ZNF532Q9HCE3 1301 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 TNPO2O14787 897 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 POLR3DP05423 398 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 EN2P19622 333 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 GRK4P32298 578 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 PRKCZQ05513 592 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 SHROOM1Q2M3G4 852 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 TTC6Q86TZ1 520 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 EDC3Q96F86 508 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 FEZ1Q99689 392 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 PAG1Q9NWQ8 432 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 SERPINB13Q9UIV8 391 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 ZBTB21Q9ULJ3 1066 aa11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 MKI67P46013 3256 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-216ENST00000574344 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 FAM110CQ1W6H9 321 aa11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 PRPF38BQ5VTL8 546 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 COA7Q96BR5 231 aa11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 WDR18Q9BV38 432 aa11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.68□□□□□ -0.543e-9■■■□□ 15.1
NPLOC4-216ENST00000574344 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
NPLOC4-216ENST00000574344 GH2P01242 217 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 GCLCP48506 637 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 BACE1P56817 501 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 UBXN2AP68543 259 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 RAB3GAP1Q15042 981 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 ZYXQ15942 572 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 EHD4Q9H223 541 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 CABP5Q9NP86 173 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 GABRQQ9UN88 632 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
NPLOC4-216ENST00000574344 C19orf81C9J6K1 198 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 ATP5JP18859 108 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 JAG1P78504 1218 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 MTFR1Q15390 333 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 ABCB5Q2M3G0 1257 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 CERKLQ49MI3 558 aaPredicted RBP11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 HAUS7Q99871 368 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 ARMT1Q9H993 441 aa11.66□□□□□ -0.54
NPLOC4-216ENST00000574344 ADCY3O60266 1144 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 MBD4O95243 580 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 ADD2P35612 726 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 FLT3LGP49771 235 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 PLCD1P51178 756 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 ZSCAN25Q6NSZ9 544 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 CCAR1Q8IX12 1150 aaKnown RBP11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
NPLOC4-216ENST00000574344 TCRBV5S4A2TA0A5A2 114 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 CCL5P13501 91 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 ELNP15502 786 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 HERVK_113P62684 666 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 SLFNL1Q499Z3 407 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 PAGR1Q9BTK6 254 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
NPLOC4-216ENST00000574344 COL11A1P12107 1806 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 INHAP05111 366 aa11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 SHMT1P34896 483 aa11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 USP14P54578 494 aa11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 NKX2-3Q8TAU0 364 aa11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 P2RX7Q99572 595 aaKnown RBP11.63□□□□□ -0.55
NPLOC4-216ENST00000574344 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms