RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 DNAJC18Q9H819 358 aa18.06■□□□□ 0.48
NPLOC4-207ENST00000572346 RBM27Q9P2N5 1060 aaKnown RBP18.06■□□□□ 0.48
NPLOC4-207ENST00000572346 HMMRO75330 724 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 TFRCP02786 760 aaKnown RBP18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 NEFLP07196 543 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 ASNSP08243 561 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 CAPN2P17655 700 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 ZAP70P43403 619 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 JAG1P78504 1218 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 MTMR2Q13614 643 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 CEP85Q6P2H3 762 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 METTL16Q86W50 562 aaKnown RBP18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 FOXP4Q8IVH2 680 aaPredicted RBP18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 PALD1Q9ULE6 856 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 NR2E3Q9Y5X4 410 aa18.05■□□□□ 0.48
NPLOC4-207ENST00000572346 IGSF3O75054 1194 aa18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 BACE1P56817 501 aa18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 AAMPQ13685 434 aa18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 CRACR2BQ8N4Y2 399 aaPredicted RBP18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 CRISPLD2Q9H0B8 497 aa18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 PIH1D3Q9NQM4 214 aaKnown RBP18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 MORF4L1Q9UBU8 362 aa18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 DBNLQ9UJU6 430 aaKnown RBP18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 GJD2Q9UKL4 321 aa18.04■□□□□ 0.48
NPLOC4-207ENST00000572346 PLXNB2O15031 1838 aa18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 GDF11O95390 407 aa18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 HOXA7P31268 230 aaPredicted RBP18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 IRX3P78415 501 aaPredicted RBP18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 SHROOM1Q2M3G4 852 aaPredicted RBP18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 PRO3102Q9H379 93 aa18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 TLR7Q9NYK1 1049 aaKnown RBP18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 TMOD4Q9NZQ9 345 aa18.03■□□□□ 0.48
NPLOC4-207ENST00000572346 HMGCRP04035 888 aa18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 DYNLL1P63167 89 aaKnown RBP18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 EAF2Q96CJ1 260 aaPredicted RBP18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 P2RX7Q99572 595 aaKnown RBP18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 TRIM34Q9BYJ4 488 aa18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 CCDC8Q9H0W5 538 aaPredicted RBP18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 GINM1Q9NU53 330 aa18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 SAP30BPQ9UHR5 308 aaKnown RBP18.02■□□□□ 0.48
NPLOC4-207ENST00000572346 C19orf81C9J6K1 198 aa18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 EVI5O60447 810 aa18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 CYP7A1P22680 504 aa18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 PAWRQ96IZ0 340 aaKnown RBP18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 ZBTB21Q9ULJ3 1066 aa18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 MYH1P12882 1939 aa18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 ALPK3Q96L96 1907 aa18.01■□□□□ 0.47
NPLOC4-207ENST00000572346 PEX10O60683 326 aa18■□□□□ 0.47
NPLOC4-207ENST00000572346 IDH1O75874 414 aaKnown RBP18■□□□□ 0.47
NPLOC4-207ENST00000572346 HLA-DOAP06340 250 aa18■□□□□ 0.47
NPLOC4-207ENST00000572346 HERVK_113P62684 666 aa18■□□□□ 0.47
NPLOC4-207ENST00000572346 TRIM32Q13049 653 aa18■□□□□ 0.47
NPLOC4-207ENST00000572346 DIS3LQ8TF46 1054 aaKnown RBP18■□□□□ 0.47
NPLOC4-207ENST00000572346 TXNRD2Q9NNW7 524 aa18■□□□□ 0.47
NPLOC4-207ENST00000572346 RANBP2P49792 3224 aaKnown RBP18■□□□□ 0.47
NPLOC4-207ENST00000572346 RPTORQ8N122 1335 aa17.99■□□□□ 0.47
NPLOC4-207ENST00000572346 MIGA1Q8NAN2 632 aa17.99■□□□□ 0.47
NPLOC4-207ENST00000572346 GPRC5AQ8NFJ5 357 aa17.99■□□□□ 0.47
NPLOC4-207ENST00000572346 TRIB2Q92519 343 aa17.99■□□□□ 0.47
NPLOC4-207ENST00000572346 HMX1Q9NP08 348 aaPredicted RBP17.99■□□□□ 0.47
NPLOC4-207ENST00000572346 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
NPLOC4-207ENST00000572346 CYP2B6P20813 491 aa17.98■□□□□ 0.47
NPLOC4-207ENST00000572346 NECAB2Q7Z6G3 386 aa17.98■□□□□ 0.47
NPLOC4-207ENST00000572346 MAGEB6Q8N7X4 407 aa17.98■□□□□ 0.47
NPLOC4-207ENST00000572346 ANKLE1Q8NAG6 615 aa17.98■□□□□ 0.47
NPLOC4-207ENST00000572346 EMILIN3Q9NT22 766 aa17.98■□□□□ 0.47
NPLOC4-207ENST00000572346 RBPJLQ9UBG7 517 aa17.98■□□□□ 0.47
NPLOC4-207ENST00000572346 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
NPLOC4-207ENST00000572346 GH2P01242 217 aa17.97■□□□□ 0.47
NPLOC4-207ENST00000572346 USP5P45974 858 aa17.97■□□□□ 0.47
NPLOC4-207ENST00000572346 CERS3Q8IU89 383 aa17.97■□□□□ 0.47
NPLOC4-207ENST00000572346 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
NPLOC4-207ENST00000572346 SOCS4Q8WXH5 440 aa17.97■□□□□ 0.47
NPLOC4-207ENST00000572346 NUDT12Q9BQG2 462 aa17.97■□□□□ 0.47
NPLOC4-207ENST00000572346 ANTXR1Q9H6X2 564 aa17.97■□□□□ 0.47
NPLOC4-207ENST00000572346 SZT2Q5T011 3432 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 ERVK-9P63128 1117 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 ERVK-24P63145 666 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 Q3C1V9 767 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 HSP90AB4PQ58FF6 505 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 MAP3K21Q5TCX8 1036 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 TATDN1Q6P1N9 297 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 USP17L2Q6R6M4 530 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 POTEEQ6S8J3 1075 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 EXOC6BQ9Y2D4 811 aa17.96■□□□□ 0.47
NPLOC4-207ENST00000572346 DDX60LQ5H9U9 1706 aaKnown RBP17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 XRCC5P13010 732 aaKnown RBP17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 MAPK4P31152 587 aa17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 MNX1P50219 401 aaPredicted RBP17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 MAP3K12Q12852 859 aa17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 AACSQ86V21 672 aa17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 GTF3C2Q8WUA4 911 aaPredicted RBP17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 C12orf42Q96LP6 360 aa17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 PAGR1Q9BTK6 254 aa17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 EHD4Q9H223 541 aa17.95■□□□□ 0.46
NPLOC4-207ENST00000572346 PORCNQ9H237 461 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms