RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 COL13A1Q5TAT6 717 aaPredicted RBP9.27□□□□□ -0.93
CNOT1-222ENST00000570139 ASAP3Q8TDY4 903 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 DNAJC7Q99615 494 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 MAPK8IP1Q9UQF2 711 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 CDC42BPGQ6DT37 1551 aa9.27□□□□□ -0.93
CNOT1-222ENST00000570139 PARD3Q8TEW0 1356 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 ANKRD26Q9UPS8 1709 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 DCDC2BA2VCK2 349 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 PDE2AO00408 941 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-222ENST00000570139 TLR3O15455 904 aaKnown RBP9.26□□□□□ -0.93
CNOT1-222ENST00000570139 BPNT1O95861 308 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 ACPPP15309 386 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 SPEM2Q0P670 501 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 SPRED3Q2MJR0 410 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 BNC2Q6ZN30 1099 aaPredicted RBP9.26□□□□□ -0.93
CNOT1-222ENST00000570139 DHX32Q7L7V1 743 aaKnown RBP9.26□□□□□ -0.93
CNOT1-222ENST00000570139 NXPE3Q969Y0 559 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 ZNRF3Q9ULT6 936 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 CYP8B1Q9UNU6 501 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 KNSTRNQ9Y448 316 aa9.26□□□□□ -0.93
CNOT1-222ENST00000570139 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-222ENST00000570139 PTPRUQ92729 1446 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 METTL12A8MUP2 240 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 PAGE1O75459 146 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 TRIM37O94972 964 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 LRRC14Q15048 493 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 CELF2-AS1Q8N7Q2 184 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 FAM169BQ8N8A8 192 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 NSUN5Q96P11 429 aaKnown RBP9.25□□□□□ -0.93
CNOT1-222ENST00000570139 PANK3Q9H999 370 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 MARK1Q9P0L2 795 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 LMTK3Q96Q04 1460 aa9.25□□□□□ -0.93
CNOT1-222ENST00000570139 ANKARQ7Z5J8 1434 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 FAM221AA4D161 298 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 TNP2Q05952 138 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.24□□□□□ -0.93
CNOT1-222ENST00000570139 REC114Q7Z4M0 266 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 LILRB2Q8N423 598 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 SLC26A8Q96RN1 970 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 RBSNQ9H1K0 784 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 TMEM260Q9NX78 707 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 TERF2IPQ9NYB0 399 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 FMN2Q9NZ56 1722 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 MYBBP1AQ9BQG0 1328 aaKnown RBP9.24□□□□□ -0.93
CNOT1-222ENST00000570139 AKAP12Q02952 1782 aa9.24□□□□□ -0.93
CNOT1-222ENST00000570139 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
CNOT1-222ENST00000570139 NCOA3Q9Y6Q9 1424 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 MON2Q7Z3U7 1717 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 H7C1W4 665 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 NFKBIEO00221 500 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 CILPO75339 1184 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
CNOT1-222ENST00000570139 FAAP100Q0VG06 881 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 PCSK7Q16549 785 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 MTERF2Q49AM1 385 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 CCDC181Q5TID7 509 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 C16orf86Q6ZW13 317 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 KIAA0907Q7Z7F0 614 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-222ENST00000570139 RBBP8NLQ8NC74 664 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-222ENST00000570139 FBXO27Q8NI29 283 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 JARID2Q92833 1246 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-222ENST00000570139 BHMTQ93088 406 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 FEZ1Q99689 392 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 PBX4Q9BYU1 374 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 CLEC4MQ9H2X3 399 aaPredicted RBP9.23□□□□□ -0.93
CNOT1-222ENST00000570139 ST7Q9NRC1 585 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 KLHL42Q9P2K6 505 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 KIF20BQ96Q89 1820 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 PLEKHH1Q9ULM0 1364 aa9.23□□□□□ -0.93
CNOT1-222ENST00000570139 NALCNQ8IZF0 1738 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 ESYT3A0FGR9 886 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 TRPA1O75762 1119 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 NME2P22392 152 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 CASP7P55210 303 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 GPLD1P80108 840 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 C2orf27AQ580R0 203 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 SCARA3Q6AZY7 606 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 HDGFL2Q7Z4V5 671 aaPredicted RBP9.22□□□□□ -0.93
CNOT1-222ENST00000570139 TRERF1Q96PN7 1200 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 CDK19Q9BWU1 502 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 EMILIN2Q9BXX0 1053 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 CGNL1Q0VF96 1302 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 NSD3Q9BZ95 1437 aa9.22□□□□□ -0.93
CNOT1-222ENST00000570139 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.94
CNOT1-222ENST00000570139 SAFB2Q14151 953 aaKnown RBP eCLIP9.21□□□□□ -0.94
CNOT1-222ENST00000570139 LARP1BQ659C4 914 aaKnown RBP9.21□□□□□ -0.94
CNOT1-222ENST00000570139 RIPOR1Q6ZS17 1223 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 GK5Q6ZS86 529 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 TRIM67Q6ZTA4 783 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 WAPLQ7Z5K2 1190 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 SYNPOQ8N3V7 929 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 C19orf47Q8N9M1 422 aaKnown RBP9.21□□□□□ -0.94
CNOT1-222ENST00000570139 THAP3Q8WTV1 239 aaPredicted RBP9.21□□□□□ -0.94
CNOT1-222ENST00000570139 BSNDQ8WZ55 320 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 HHIPQ96QV1 700 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 NUCKS1Q9H1E3 243 aaKnown RBP9.21□□□□□ -0.94
CNOT1-222ENST00000570139 BRMS1Q9HCU9 246 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 PCDHB5Q9Y5E4 795 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 PPIP5K1Q6PFW1 1433 aa9.21□□□□□ -0.94
CNOT1-222ENST00000570139 ADGRL3Q9HAR2 1447 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms