RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 RBM6P78332 1123 aaKnown RBP13.14□□□□□ -0.31
CDH1-210ENST00000566612 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 GOLGA6L9A6NEM1 432 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 PSMA7O14818 248 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 ERLIN1O75477 346 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 CTDNEP1O95476 244 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 UBXN1Q04323 297 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 SPA17Q15506 151 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 EEF2KMTQ96G04 330 aa13.14□□□□□ -0.31
CDH1-210ENST00000566612 PYM1Q9BRP8 204 aaKnown RBP13.14□□□□□ -0.31
CDH1-210ENST00000566612 CCDC94Q9BW85 323 aaPredicted RBP13.14□□□□□ -0.31
CDH1-210ENST00000566612 CCDC175P0C221 793 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 AMPD3Q01432 767 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
CDH1-210ENST00000566612 ERCC3P19447 782 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 ELF2Q15723 593 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 IFNAR1P17181 557 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 UBE4AQ14139 1066 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
CDH1-210ENST00000566612 JAKMIP3Q5VZ66 844 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
CDH1-210ENST00000566612 KIF28PB7ZC32 967 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 AKR1B15C9JRZ8 316 aaPredicted RBP13.12□□□□□ -0.31
CDH1-210ENST00000566612 GPIHBP1Q8IV16 184 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
CDH1-210ENST00000566612 PUF60Q9UHX1 559 aaKnown RBP13.12□□□□□ -0.31
CDH1-210ENST00000566612 ARHGAP23Q9P227 1491 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
CDH1-210ENST00000566612 CDC25AP30304 524 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 SPAG1Q07617 926 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 KCNB2Q92953 911 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 SENP2Q9HC62 589 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 PTGDRQ13258 359 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 CCDC144BQ3MJ40 725 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 AXDND1Q5T1B0 1012 aaPredicted RBP13.12□□□□□ -0.31
CDH1-210ENST00000566612 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
CDH1-210ENST00000566612 ZNF215Q9UL58 517 aaPredicted RBP13.12□□□□□ -0.31
CDH1-210ENST00000566612 HLA-DOAP06340 250 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
CDH1-210ENST00000566612 LIFRP42702 1097 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 ZNF569Q5MCW4 686 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 SMYD4Q8IYR2 804 aaPredicted RBP13.11□□□□□ -0.31
CDH1-210ENST00000566612 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
CDH1-210ENST00000566612 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDH1-210ENST00000566612 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
CDH1-210ENST00000566612 FDPSP14324 419 aaKnown RBP13.11□□□□□ -0.31
CDH1-210ENST00000566612 CCDC40Q4G0X9 1142 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 RASGRP4Q8TDF6 673 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 DRC1Q96MC2 740 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 SYNRGQ9UMZ2 1314 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 SLIT1O75093 1534 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 MMP1P03956 469 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 CSF1RP07333 972 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
CDH1-210ENST00000566612 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 TAB2Q9NYJ8 693 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
CDH1-210ENST00000566612 GSG1L2A8MUP6 293 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 CCNT1O60563 726 aaKnown RBP13.1□□□□□ -0.31
CDH1-210ENST00000566612 TXKP42681 527 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 ANTXR2P58335 489 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
CDH1-210ENST00000566612 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 TSG101Q99816 390 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 ZNF804BA4D1E1 1349 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 RFX7Q2KHR2 1363 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 PPP6R2O75170 966 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 GNA11P29992 359 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 MATR3P43243 847 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH1-210ENST00000566612 SYMPKQ92797 1274 aaKnown RBP13.1□□□□□ -0.31
CDH1-210ENST00000566612 CELF1Q92879 486 aaKnown RBP13.1□□□□□ -0.31
CDH1-210ENST00000566612 GPR101Q96P66 508 aaPredicted RBP13.1□□□□□ -0.31
CDH1-210ENST00000566612 MMRN2Q9H8L6 949 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 LY9Q9HBG7 655 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 GGA1Q9UJY5 639 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 CASP7P55210 303 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 JADE2Q9NQC1 790 aa13.1□□□□□ -0.31
CDH1-210ENST00000566612 AKR1B10O60218 316 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 PLEKHA8P1O95397 391 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 USP17L8P0C7I0 530 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 TCERG1LQ5VWI1 586 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
CDH1-210ENST00000566612 KRT222Q8N1A0 295 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms