RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 ANKLE1Q8NAG6 615 aa25.53■■□□□ 1.68
HERC2-204ENST00000563945 GPRC5AQ8NFJ5 357 aa25.53■■□□□ 1.68
HERC2-204ENST00000563945 ZNF512BQ96KM6 892 aaPredicted RBP25.53■■□□□ 1.68
HERC2-204ENST00000563945 SAP30BPQ9UHR5 308 aaKnown RBP25.53■■□□□ 1.68
HERC2-204ENST00000563945 GJD2Q9UKL4 321 aa25.53■■□□□ 1.68
HERC2-204ENST00000563945 ATAD5Q96QE3 1844 aa25.53■■□□□ 1.68
HERC2-204ENST00000563945 CYP2B6P20813 491 aa25.52■■□□□ 1.68
HERC2-204ENST00000563945 CYP7A1P22680 504 aa25.52■■□□□ 1.68
HERC2-204ENST00000563945 PDE3AQ14432 1141 aa25.52■■□□□ 1.68
HERC2-204ENST00000563945 NUDT12Q9BQG2 462 aa25.52■■□□□ 1.68
HERC2-204ENST00000563945 CWC22Q9HCG8 908 aaKnown RBP25.52■■□□□ 1.68
HERC2-204ENST00000563945 IDH1O75874 414 aaKnown RBP25.51■■□□□ 1.67
HERC2-204ENST00000563945 HERVK_113P62684 666 aa25.51■■□□□ 1.67
HERC2-204ENST00000563945 CERS3Q8IU89 383 aa25.51■■□□□ 1.67
HERC2-204ENST00000563945 ITPRIPQ8IWB1 547 aa25.51■■□□□ 1.67
HERC2-204ENST00000563945 GTF3C2Q8WUA4 911 aaPredicted RBP25.51■■□□□ 1.67
HERC2-204ENST00000563945 C1orf115Q9H7X2 142 aa25.51■■□□□ 1.67
HERC2-204ENST00000563945 LOC285556D6RIA3 1793 aa25.51■■□□□ 1.67
HERC2-204ENST00000563945 USP5P45974 858 aa25.5■■□□□ 1.67
HERC2-204ENST00000563945 ADGRA1Q86SQ6 560 aa25.5■■□□□ 1.67
HERC2-204ENST00000563945 METTL16Q86W50 562 aaKnown RBP25.5■■□□□ 1.67
HERC2-204ENST00000563945 NBPF3Q9H094 633 aa25.5■■□□□ 1.67
HERC2-204ENST00000563945 CCDC8Q9H0W5 538 aaPredicted RBP25.5■■□□□ 1.67
HERC2-204ENST00000563945 PIH1D3Q9NQM4 214 aaKnown RBP25.5■■□□□ 1.67
HERC2-204ENST00000563945 ZBTB21Q9ULJ3 1066 aa25.5■■□□□ 1.67
HERC2-204ENST00000563945 A0A1W2PPC1 479 aa25.49■■□□□ 1.67
HERC2-204ENST00000563945 MAPK4P31152 587 aa25.49■■□□□ 1.67
HERC2-204ENST00000563945 DYNLL1P63167 89 aaKnown RBP25.49■■□□□ 1.67
HERC2-204ENST00000563945 USP17L2Q6R6M4 530 aa25.49■■□□□ 1.67
HERC2-204ENST00000563945 TRMT44Q8IYL2 757 aaKnown RBP25.49■■□□□ 1.67
HERC2-204ENST00000563945 SOCS4Q8WXH5 440 aa25.49■■□□□ 1.67
HERC2-204ENST00000563945 FEZ1Q99689 392 aa25.48■■□□□ 1.67
HERC2-204ENST00000563945 PAGR1Q9BTK6 254 aa25.48■■□□□ 1.67
HERC2-204ENST00000563945 DNAJC18Q9H819 358 aa25.48■■□□□ 1.67
HERC2-204ENST00000563945 STAP2Q9UGK3 403 aa25.48■■□□□ 1.67
HERC2-204ENST00000563945 DBNLQ9UJU6 430 aaKnown RBP25.48■■□□□ 1.67
HERC2-204ENST00000563945 NOP58Q9Y2X3 529 aaKnown RBP25.48■■□□□ 1.67
HERC2-204ENST00000563945 JAG1P78504 1218 aa25.47■■□□□ 1.67
HERC2-204ENST00000563945 TRIM32Q13049 653 aa25.47■■□□□ 1.67
HERC2-204ENST00000563945 DIS3LQ8TF46 1054 aaKnown RBP25.47■■□□□ 1.67
HERC2-204ENST00000563945 PRO3102Q9H379 93 aa25.47■■□□□ 1.67
HERC2-204ENST00000563945 GH2P01242 217 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 XRCC5P13010 732 aaKnown RBP25.46■■□□□ 1.67
HERC2-204ENST00000563945 MAP3K12Q12852 859 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 TTC6Q86TZ1 520 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 C7orf61Q8IZ16 206 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 MIGA1Q8NAN2 632 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 TRIB2Q92519 343 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 C11orf49Q9H6J7 331 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 RBPJLQ9UBG7 517 aa25.46■■□□□ 1.67
HERC2-204ENST00000563945 ZKSCAN1P17029 563 aaPredicted RBP25.45■■□□□ 1.66
HERC2-204ENST00000563945 ERVK-9P63128 1117 aa25.45■■□□□ 1.66
HERC2-204ENST00000563945 ERVK-24P63145 666 aa25.45■■□□□ 1.66
HERC2-204ENST00000563945 MAGEB6Q8N7X4 407 aa25.45■■□□□ 1.66
HERC2-204ENST00000563945 EAF2Q96CJ1 260 aaPredicted RBP25.45■■□□□ 1.66
HERC2-204ENST00000563945 TXNRD2Q9NNW7 524 aa25.45■■□□□ 1.66
HERC2-204ENST00000563945 MAST2Q6P0Q8 1798 aa25.45■■□□□ 1.66
HERC2-204ENST00000563945 GLRX3O76003 335 aaKnown RBP25.44■■□□□ 1.66
HERC2-204ENST00000563945 PRKAR2AP13861 404 aaKnown RBP25.44■■□□□ 1.66
HERC2-204ENST00000563945 RGS2P41220 211 aa25.44■■□□□ 1.66
HERC2-204ENST00000563945 SHROOM1Q2M3G4 852 aaPredicted RBP25.44■■□□□ 1.66
HERC2-204ENST00000563945 ERC1Q8IUD2 1116 aa25.44■■□□□ 1.66
HERC2-204ENST00000563945 CABP5Q9NP86 173 aa25.44■■□□□ 1.66
HERC2-204ENST00000563945 EMILIN3Q9NT22 766 aa25.44■■□□□ 1.66
HERC2-204ENST00000563945 TLR7Q9NYK1 1049 aaKnown RBP25.44■■□□□ 1.66
HERC2-204ENST00000563945 SERPINB13Q9UIV8 391 aa25.44■■□□□ 1.66
HERC2-204ENST00000563945 USP17L15C9J2P7 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L13C9JLJ4 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L11C9JVI0 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L18D6R9N7 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L22D6RA61 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L17D6RBQ6 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L19D6RCP7 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L20D6RJB6 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 PEX10O60683 326 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 CCNA1P78396 465 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 HNRNPUQ00839 825 aaKnown RBP eCLIP25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP17L24Q0WX57 530 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 RAB3GAP1Q15042 981 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 ZYXQ15942 572 aaKnown RBP25.43■■□□□ 1.66
HERC2-204ENST00000563945 TMED8Q6PL24 325 aaPredicted RBP25.43■■□□□ 1.66
HERC2-204ENST00000563945 PLEKHH3Q7Z736 793 aa25.43■■□□□ 1.66
HERC2-204ENST00000563945 USP14P54578 494 aa25.42■■□□□ 1.66
HERC2-204ENST00000563945 Q3C1V9 767 aa25.42■■□□□ 1.66
HERC2-204ENST00000563945 CERKLQ49MI3 558 aaPredicted RBP25.42■■□□□ 1.66
HERC2-204ENST00000563945 GPR142Q7Z601 462 aa25.42■■□□□ 1.66
HERC2-204ENST00000563945 OGDHLQ9ULD0 1010 aa25.42■■□□□ 1.66
HERC2-204ENST00000563945 ZMYND8Q9ULU4 1186 aaPredicted RBP25.42■■□□□ 1.66
HERC2-204ENST00000563945 WDR78Q5VTH9 848 aa25.41■■□□□ 1.66
HERC2-204ENST00000563945 AACSQ86V21 672 aa25.41■■□□□ 1.66
HERC2-204ENST00000563945 RABGAP1Q9Y3P9 1069 aa25.41■■□□□ 1.66
HERC2-204ENST00000563945 SIPA1L1O43166 1804 aa25.4■■□□□ 1.66
HERC2-204ENST00000563945 ABCB5Q2M3G0 1257 aa25.4■■□□□ 1.66
HERC2-204ENST00000563945 MAP3K21Q5TCX8 1036 aa25.4■■□□□ 1.66
HERC2-204ENST00000563945 TATDN1Q6P1N9 297 aa25.4■■□□□ 1.66
HERC2-204ENST00000563945 EHD4Q9H223 541 aa25.4■■□□□ 1.66
HERC2-204ENST00000563945 PORCNQ9H237 461 aa25.4■■□□□ 1.66
HERC2-204ENST00000563945 POLR3DP05423 398 aaPredicted RBP25.39■■□□□ 1.66
HERC2-204ENST00000563945 CACNB2Q08289 660 aaPredicted RBP25.39■■□□□ 1.66
HERC2-204ENST00000563945 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms