RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 UBXN4Q92575 508 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 TMEM87BQ96K49 555 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 UPK3BL1B0FP48 263 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 UPK3BL2E5RIL1 263 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 DYNC1LI2O43237 492 aaPredicted RBP8.79□□□□□ -1
LINC00557-201ENST00000563184 NFICP08651 508 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 MAP4P27816 1152 aaKnown RBP8.79□□□□□ -1
LINC00557-201ENST00000563184 CAP2P40123 477 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 DOC2BQ14184 412 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 SEZ6L2Q6UXD5 910 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 RUFY4Q6ZNE9 571 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 KCT2Q8NC54 265 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 GMIPQ9P107 970 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 KLHL3Q9UH77 587 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 PCOLCE2Q9UKZ9 415 aa8.79□□□□□ -1
LINC00557-201ENST00000563184 RBL2Q08999 1139 aa8.78□□□□□ -1
LINC00557-201ENST00000563184 LRRFIP1Q32MZ4 808 aaKnown RBP8.78□□□□□ -1
LINC00557-201ENST00000563184 SLC6A19Q695T7 634 aa8.78□□□□□ -1
LINC00557-201ENST00000563184 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.78□□□□□ -1
LINC00557-201ENST00000563184 ATG4CQ96DT6 458 aa8.78□□□□□ -1
LINC00557-201ENST00000563184 DPH2Q9BQC3 489 aaPredicted RBP8.78□□□□□ -1
LINC00557-201ENST00000563184 DAGLAQ9Y4D2 1042 aa8.78□□□□□ -1
LINC00557-201ENST00000563184 STK10O94804 968 aaKnown RBP8.77□□□□□ -1.01
LINC00557-201ENST00000563184 CST3P01034 146 aaPredicted RBP8.77□□□□□ -1.01
LINC00557-201ENST00000563184 PRAMEF13Q5VWM6 474 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 CDCP2Q5VXM1 449 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 CDC37L1Q7L3B6 337 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 OR6P1Q8NGX9 317 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 PSMG3-AS1Q96PY0 264 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 CRBNQ96SW2 442 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 DNAJC2Q99543 621 aaKnown RBP8.77□□□□□ -1.01
LINC00557-201ENST00000563184 CNNM2Q9H8M5 875 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 SSU72Q9NP77 194 aaKnown RBP8.77□□□□□ -1.01
LINC00557-201ENST00000563184 TPSG1Q9NRR2 321 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 PRKAG3Q9UGI9 489 aa8.77□□□□□ -1.01
LINC00557-201ENST00000563184 SMAD7O15105 426 aaKnown RBP8.76□□□□□ -1.01
LINC00557-201ENST00000563184 ACRP10323 421 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 NME1P15531 152 aaKnown RBP8.76□□□□□ -1.01
LINC00557-201ENST00000563184 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
LINC00557-201ENST00000563184 ARSHQ5FYA8 562 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 NKAPLQ5M9Q1 402 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 ARMCX6Q7L4S7 300 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 SLFN12Q8IYM2 578 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 FAM13CQ8NE31 585 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 YIPF2Q9BWQ6 316 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 LGR6Q9HBX8 967 aa8.76□□□□□ -1.01
LINC00557-201ENST00000563184 TNFRSF10CO14798 259 aa8.75□□□□□ -1.01
LINC00557-201ENST00000563184 DHX15O43143 795 aaKnown RBP8.75□□□□□ -1.01
LINC00557-201ENST00000563184 RXRBP28702 533 aa8.75□□□□□ -1.01
LINC00557-201ENST00000563184 MLECQ14165 292 aa8.75□□□□□ -1.01
LINC00557-201ENST00000563184 NLRC3Q7RTR2 1065 aa8.75□□□□□ -1.01
LINC00557-201ENST00000563184 TAB3Q8N5C8 712 aaPredicted RBP8.75□□□□□ -1.01
LINC00557-201ENST00000563184 TP53INP1Q96A56 240 aa8.75□□□□□ -1.01
LINC00557-201ENST00000563184 FOXQ1Q9C009 403 aa8.75□□□□□ -1.01
LINC00557-201ENST00000563184 C1GALT1Q9NS00 363 aa8.75□□□□□ -1.01
LINC00557-201ENST00000563184 FAM95CA0A1B0GW59 222 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 KLF4O43474 513 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 LRIG2O94898 1065 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 YARSP54577 528 aaKnown RBP8.74□□□□□ -1.01
LINC00557-201ENST00000563184 MAP7Q14244 749 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 BEND4Q6ZU67 534 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 ANKS3Q6ZW76 656 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 TM9SF2Q99805 663 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 TNKS2Q9H2K2 1166 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 KCNF1Q9H3M0 494 aa8.74□□□□□ -1.01
LINC00557-201ENST00000563184 H2AFB1P0C5Y9 115 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 H2AFB2P0C5Z0 115 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 GUCY2CP25092 1073 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 POLR2BP30876 1174 aaKnown RBP8.73□□□□□ -1.01
LINC00557-201ENST00000563184 CASP7P55210 303 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 C19orf47Q8N9M1 422 aaKnown RBP8.73□□□□□ -1.01
LINC00557-201ENST00000563184 XAGE3Q8WTP9 111 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 HNRNPLLQ8WVV9 542 aaKnown RBP8.73□□□□□ -1.01
LINC00557-201ENST00000563184 SLC9A7Q96T83 725 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 FAM83CQ9BQN1 747 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 HIRIP3Q9BW71 556 aaPredicted RBP8.73□□□□□ -1.01
LINC00557-201ENST00000563184 SEMA6BQ9H3T3 888 aa8.73□□□□□ -1.01
LINC00557-201ENST00000563184 A0A1W2PQH9 124 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 CDK5R2Q13319 367 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 NFKBIBQ15653 356 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 ZYXQ15942 572 aaKnown RBP8.72□□□□□ -1.01
LINC00557-201ENST00000563184 INTS3Q68E01 1043 aaKnown RBP8.72□□□□□ -1.01
LINC00557-201ENST00000563184 PPP1R13LQ8WUF5 828 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 GATA6Q92908 595 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 KIF2CQ99661 725 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 RAXQ9Y2V3 346 aa8.72□□□□□ -1.01
LINC00557-201ENST00000563184 HMX2A2RU54 273 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 RGS13O14921 159 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 DYRK3O43781 588 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 UBOX5O94941 541 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 SLITRK5O94991 958 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 RAG1P15918 1043 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 TNNI3KQ59H18 835 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 PAOXQ6QHF9 649 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 PRR23CQ6ZRP0 262 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 TTC6Q86TZ1 520 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms