RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 TRIOBPQ9H2D6 2365 aa20.3■□□□□ 0.84
CMTM3-205ENST00000562707 CYP2B6P20813 491 aa20.29■□□□□ 0.84
CMTM3-205ENST00000562707 HERVK_113P62684 666 aa20.29■□□□□ 0.84
CMTM3-205ENST00000562707 JAG1P78504 1218 aa20.29■□□□□ 0.84
CMTM3-205ENST00000562707 TRIM32Q13049 653 aa20.29■□□□□ 0.84
CMTM3-205ENST00000562707 NUDT12Q9BQG2 462 aa20.29■□□□□ 0.84
CMTM3-205ENST00000562707 NBPF3Q9H094 633 aa20.29■□□□□ 0.84
CMTM3-205ENST00000562707 MGAMO43451 1857 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 GDF11O95390 407 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 ZAP70P43403 619 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 PDE3AQ14432 1141 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 ADGRA1Q86SQ6 560 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 SSH3Q8TE77 659 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 SOCS4Q8WXH5 440 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 DNAJC18Q9H819 358 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 SAP30BPQ9UHR5 308 aaKnown RBP20.28■□□□□ 0.84
CMTM3-205ENST00000562707 ZBTB21Q9ULJ3 1066 aa20.28■□□□□ 0.84
CMTM3-205ENST00000562707 PHIPQ8WWQ0 1821 aa20.27■□□□□ 0.84
CMTM3-205ENST00000562707 XRCC5P13010 732 aaKnown RBP20.27■□□□□ 0.84
CMTM3-205ENST00000562707 CYP7A1P22680 504 aa20.27■□□□□ 0.84
CMTM3-205ENST00000562707 MAPK4P31152 587 aa20.27■□□□□ 0.84
CMTM3-205ENST00000562707 TRMT44Q8IYL2 757 aaKnown RBP20.27■□□□□ 0.84
CMTM3-205ENST00000562707 C7orf61Q8IZ16 206 aa20.27■□□□□ 0.84
CMTM3-205ENST00000562707 GTF3C2Q8WUA4 911 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-205ENST00000562707 TRIB2Q92519 343 aa20.27■□□□□ 0.84
CMTM3-205ENST00000562707 PIH1D3Q9NQM4 214 aaKnown RBP20.27■□□□□ 0.84
CMTM3-205ENST00000562707 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L2Q6R6M4 530 aa20.26■□□□□ 0.83
CMTM3-205ENST00000562707 CERS3Q8IU89 383 aa20.26■□□□□ 0.83
CMTM3-205ENST00000562707 C11orf49Q9H6J7 331 aa20.26■□□□□ 0.83
CMTM3-205ENST00000562707 TXNRD2Q9NNW7 524 aa20.26■□□□□ 0.83
CMTM3-205ENST00000562707 RBPJLQ9UBG7 517 aa20.26■□□□□ 0.83
CMTM3-205ENST00000562707 PRKAR2AP13861 404 aaKnown RBP20.25■□□□□ 0.83
CMTM3-205ENST00000562707 CWC22Q9HCG8 908 aaKnown RBP20.25■□□□□ 0.83
CMTM3-205ENST00000562707 OGDHLQ9ULD0 1010 aa20.25■□□□□ 0.83
CMTM3-205ENST00000562707 PTPRFP10586 1907 aa20.25■□□□□ 0.83
CMTM3-205ENST00000562707 PEX10O60683 326 aa20.24■□□□□ 0.83
CMTM3-205ENST00000562707 IDH1O75874 414 aaKnown RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 ZKSCAN1P17029 563 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 USP5P45974 858 aa20.24■□□□□ 0.83
CMTM3-205ENST00000562707 ERVK-9P63128 1117 aa20.24■□□□□ 0.83
CMTM3-205ENST00000562707 ERVK-24P63145 666 aa20.24■□□□□ 0.83
CMTM3-205ENST00000562707 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 MAP3K21Q5TCX8 1036 aa20.24■□□□□ 0.83
CMTM3-205ENST00000562707 FTSJ3Q8IY81 847 aaKnown RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 PAGR1Q9BTK6 254 aa20.24■□□□□ 0.83
CMTM3-205ENST00000562707 CCDC8Q9H0W5 538 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 EMILIN3Q9NT22 766 aa20.24■□□□□ 0.83
CMTM3-205ENST00000562707 DBNLQ9UJU6 430 aaKnown RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 ZMYND8Q9ULU4 1186 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
CMTM3-205ENST00000562707 GH2P01242 217 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 BMP8BP34820 402 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 RGS2P41220 211 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 Q3C1V9 767 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 PLEKHH3Q7Z736 793 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 GDF15Q99988 308 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 C1orf115Q9H7X2 142 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 LOC285556D6RIA3 1793 aa20.23■□□□□ 0.83
CMTM3-205ENST00000562707 MNX1P50219 401 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-205ENST00000562707 GPR142Q7Z601 462 aa20.22■□□□□ 0.83
CMTM3-205ENST00000562707 MIGA1Q8NAN2 632 aa20.22■□□□□ 0.83
CMTM3-205ENST00000562707 FEZ1Q99689 392 aa20.22■□□□□ 0.83
CMTM3-205ENST00000562707 PORCNQ9H237 461 aa20.22■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L15C9J2P7 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L13C9JLJ4 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L11C9JVI0 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L18D6R9N7 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L22D6RA61 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L17D6RBQ6 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L19D6RCP7 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L20D6RJB6 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 SOX1O00570 391 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-205ENST00000562707 GLRX3O76003 335 aaKnown RBP20.21■□□□□ 0.83
CMTM3-205ENST00000562707 CCNA1P78396 465 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP17L24Q0WX57 530 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 MAP3K12Q12852 859 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 TATDN1Q6P1N9 297 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 TTC6Q86TZ1 520 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 ITPRIPQ8IWB1 547 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 MAGEB6Q8N7X4 407 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 USP6NLQ92738 828 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 EAF2Q96CJ1 260 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-205ENST00000562707 LRCH3Q96II8 777 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 TLR7Q9NYK1 1049 aaKnown RBP20.21■□□□□ 0.83
CMTM3-205ENST00000562707 SERPINB13Q9UIV8 391 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 RABGAP1Q9Y3P9 1069 aa20.21■□□□□ 0.83
CMTM3-205ENST00000562707 RANBP2P49792 3224 aaKnown RBP20.21■□□□□ 0.83
CMTM3-205ENST00000562707 SYN1P17600 705 aa20.2■□□□□ 0.82
CMTM3-205ENST00000562707 USP14P54578 494 aa20.2■□□□□ 0.82
CMTM3-205ENST00000562707 ZYXQ15942 572 aaKnown RBP20.2■□□□□ 0.82
CMTM3-205ENST00000562707 MORN1Q5T089 497 aa20.2■□□□□ 0.82
CMTM3-205ENST00000562707 TMED8Q6PL24 325 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-205ENST00000562707 C12orf42Q96LP6 360 aa20.2■□□□□ 0.82
CMTM3-205ENST00000562707 EHD4Q9H223 541 aa20.2■□□□□ 0.82
CMTM3-205ENST00000562707 RAB3GAP1Q15042 981 aa20.19■□□□□ 0.82
CMTM3-205ENST00000562707 CERKLQ49MI3 558 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-205ENST00000562707 SLC17A8Q8NDX2 589 aa20.19■□□□□ 0.82
CMTM3-205ENST00000562707 APBA2Q99767 749 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms