RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 WWC3Q9ULE0 1092 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 PAIP2BQ9ULR5 123 aaKnown RBP5.57□□□□□ -1.52
TCF4-215ENST00000562638 TMCC3Q9ULS5 477 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 SSX2IPQ9Y2D8 614 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 EFR3BQ9Y2G0 817 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 ZDHHC9Q9Y397 364 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 CCDC18Q5T9S5 1454 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 ATAD2BQ9ULI0 1458 aa5.57□□□□□ -1.52
TCF4-215ENST00000562638 MSH6P52701 1360 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 PHLPP2Q6ZVD8 1323 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 MYPNQ86TC9 1320 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CCDC162PA2VCL2 907 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 GOLGA6L4A6NEF3 574 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 EBAG9O00559 213 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 NPHP1O15259 732 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 PER1O15534 1290 aaPredicted RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 SGTAO43765 313 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 MGEA5O60502 916 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 PPP1R37O75864 691 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 GFPT2O94808 682 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 SEC31AO94979 1220 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 FGFR1OPO95684 399 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 TROVE2P10155 538 aaKnown RBP eCLIP5.56□□□□□ -1.52
TCF4-215ENST00000562638 CNGA1P29973 690 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 ARHGAP25P42331 645 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 AARSP49588 968 aaKnown RBP eCLIP5.56□□□□□ -1.52
TCF4-215ENST00000562638 PEX5P50542 639 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 IFFO1Q0D2I5 559 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 RASA2Q15283 850 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 SNCBQ16143 134 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 TSR1Q2NL82 804 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 CCDC183Q5T5S1 534 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 NEPROQ6NW34 567 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 ADGRD1Q6QNK2 874 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CRELD2Q6UXH1 353 aaPredicted RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 BARGINQ6ZT62 677 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 RSRC2Q7L4I2 434 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 PLA2G4DQ86XP0 818 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CNNM3Q8NE01 707 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 NSUN7Q8NE18 718 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 APPBP2Q92624 585 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CNKSR1Q969H4 720 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 RBM33Q96EV2 1170 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 VMP1Q96GC9 406 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 C8orf76Q96K31 380 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 RNPC3Q96LT9 517 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 CEP63Q96MT8 703 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 ANKRD27Q96NW4 1050 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 SPAG5Q96R06 1193 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CDC5LQ99459 802 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 MAP3K14Q99558 947 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 TSC22D3Q99576 134 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 PUS3Q9BZE2 481 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 GOLPH3LQ9H4A5 285 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CLK4Q9HAZ1 481 aaKnown RBP5.56□□□□□ -1.52
TCF4-215ENST00000562638 ZNF304Q9HCX3 659 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 ARFGAP3Q9NP61 516 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 PCMTD2Q9NV79 361 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 IFT57Q9NWB7 429 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 SCINQ9Y6U3 715 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CAPN7Q9Y6W3 813 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 CAMSAP2Q08AD1 1489 aa5.56□□□□□ -1.52
TCF4-215ENST00000562638 FAM135AQ9P2D6 1515 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 BCORL1Q5H9F3 1711 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 A0A1B0GVG6 124 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 TMEM247A6NEH6 219 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 TTC34A8MYJ7 566 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 MYO1FO00160 1098 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 BIRC5O15392 142 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 HRO43593 1189 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 TMCC1O94876 653 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CD2BP2O95400 341 aaKnown RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 VIMP08670 466 aaKnown RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 SKIP12755 728 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 GBP2P32456 591 aaPredicted RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 MATR3P43243 847 aaKnown RBP eCLIP5.55□□□□□ -1.52
TCF4-215ENST00000562638 FOSBP53539 338 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CDK17Q00537 523 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 PLOD1Q02809 727 aaPredicted RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 GSTM4Q03013 218 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 ACTN3Q08043 901 aaPredicted RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 COX10Q12887 443 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 WTAPQ15007 396 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 SEPT7Q16181 437 aaKnown RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 INAQ16352 499 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 DDB1Q16531 1140 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 SGSM1Q2NKQ1 1148 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CMPK2Q5EBM0 449 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 PPP1R15BQ5SWA1 713 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 DMRTA1Q5VZB9 504 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 ADALQ6DHV7 355 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 NAA16Q6N069 864 aaPredicted RBP5.55□□□□□ -1.52
TCF4-215ENST00000562638 C3orf62Q6ZUJ4 267 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 NANOGNBQ7Z5D8 188 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 WAPLQ7Z5K2 1190 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 EXOC3L1Q86VI1 746 aa5.55□□□□□ -1.52
TCF4-215ENST00000562638 HOOK3Q86VS8 718 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms