RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 TRAF5O00463 557 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 HLA-DOAP06340 250 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 GABPAQ06546 454 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 TBC1D10CQ8IV04 446 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 SLC44A5Q8NCS7 719 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 ROBO3Q96MS0 1386 aa13.77□□□□□ -0.21
HERC1-214ENST00000561400 SLC20A2Q08357 652 aa13.76□□□□□ -0.21
HERC1-214ENST00000561400 MIGA2Q7L4E1 593 aa13.76□□□□□ -0.21
HERC1-214ENST00000561400 METTL16Q86W50 562 aaKnown RBP13.76□□□□□ -0.21
HERC1-214ENST00000561400 CDCA5Q96FF9 252 aa13.76□□□□□ -0.21
HERC1-214ENST00000561400 EHD4Q9H223 541 aa13.76□□□□□ -0.21
HERC1-214ENST00000561400 SERPINB13Q9UIV8 391 aa13.76□□□□□ -0.21
HERC1-214ENST00000561400 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
HERC1-214ENST00000561400 FOXP4Q8IVH2 680 aaPredicted RBP13.76□□□□□ -0.21
HERC1-214ENST00000561400 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
HERC1-214ENST00000561400 MAP3K10Q02779 954 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 STOX1Q6ZVD7 989 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 C16orf86Q6ZW13 317 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 NKX2-3Q8TAU0 364 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 KCNB2Q92953 911 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 TRPM7Q96QT4 1865 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 CDK8P49336 464 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
HERC1-214ENST00000561400 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
HERC1-214ENST00000561400 E7EWF7 191 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 PRDM1O75626 825 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 FGRP09769 529 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 SHMT1P34896 483 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
HERC1-214ENST00000561400 SUPT20HL1Q3ZLR7 823 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 AKNAD1Q5T1N1 836 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 RNF20Q5VTR2 975 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 STAG1Q8WVM7 1258 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.74□□□□□ -0.21
HERC1-214ENST00000561400 HERC5Q9UII4 1024 aaKnown RBP13.74□□□□□ -0.21
HERC1-214ENST00000561400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
HERC1-214ENST00000561400 TBC1D12O60347 775 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 TOMM70O94826 608 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 TSGA10IPQ3SY00 556 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
HERC1-214ENST00000561400 NEDD4P46934 1319 aa13.73□□□□□ -0.21
HERC1-214ENST00000561400 ZSCAN20P17040 1043 aaPredicted RBP13.73□□□□□ -0.21
HERC1-214ENST00000561400 PRKG1Q13976 671 aa13.73□□□□□ -0.21
HERC1-214ENST00000561400 RRP1BQ14684 758 aaKnown RBP13.73□□□□□ -0.21
HERC1-214ENST00000561400 MFSD6Q6ZSS7 791 aa13.73□□□□□ -0.21
HERC1-214ENST00000561400 UPF2Q9HAU5 1272 aaKnown RBP13.73□□□□□ -0.21
HERC1-214ENST00000561400 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 PDE4BQ07343 736 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 L1TD1Q5T7N2 865 aaKnown RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 TATDN1Q6P1N9 297 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 SWAP70Q9UH65 585 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 ATAD5Q96QE3 1844 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 PAPPA2Q9BXP8 1791 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 PHF20L1A8MW92 1017 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 ORC4O43929 436 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 USP2O75604 605 aaPredicted RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 LETM1O95202 739 aaPredicted RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 RASA1P20936 1047 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 RBM25P49756 843 aaKnown RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 SHROOM1Q2M3G4 852 aaPredicted RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 SMC1BQ8NDV3 1235 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 TRIM34Q9BYJ4 488 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
HERC1-214ENST00000561400 ZNF408Q9H9D4 720 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
HERC1-214ENST00000561400 JAG1P78504 1218 aa13.71□□□□□ -0.21
HERC1-214ENST00000561400 SETQ01105 290 aaPredicted RBP13.71□□□□□ -0.21
HERC1-214ENST00000561400 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.21
HERC1-214ENST00000561400 DCAF15Q66K64 600 aa13.71□□□□□ -0.21
HERC1-214ENST00000561400 MOB2Q70IA6 237 aa13.71□□□□□ -0.21
HERC1-214ENST00000561400 MTERF4Q7Z6M4 381 aaKnown RBP13.71□□□□□ -0.21
HERC1-214ENST00000561400 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.21
HERC1-214ENST00000561400 RNF41Q9H4P4 317 aaPredicted RBP13.71□□□□□ -0.21
HERC1-214ENST00000561400 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
HERC1-214ENST00000561400 PASKQ96RG2 1323 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 B4E1Z4 1266 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 PCP11498 1178 aaKnown RBP13.71□□□□□ -0.22
HERC1-214ENST00000561400 NF2P35240 595 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 CST9Q5W186 159 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 KLRG1Q96E93 195 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 KIF2CQ99661 725 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 ZNF341Q9BYN7 854 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 ZNF112Q9UJU3 913 aa13.71□□□□□ -0.22
HERC1-214ENST00000561400 GREB1LQ9C091 1923 aaPredicted RBP13.71□□□□□ -0.22
HERC1-214ENST00000561400 CERKLQ49MI3 558 aaPredicted RBP13.7□□□□□ -0.22
HERC1-214ENST00000561400 FAM47AQ5JRC9 791 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 PPP1R12BO60237 982 aaPredicted RBP13.7□□□□□ -0.22
HERC1-214ENST00000561400 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
HERC1-214ENST00000561400 KDM4AO75164 1064 aa13.7□□□□□ -0.22
HERC1-214ENST00000561400 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms